fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G15500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt012347 not found in 255aa AT4G27410.2 not_not 0.578512396 III
Pt031202 not found in 343aa AT4G27410.2 not_not 0.575206611 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G15500.1     MGLQELDPLAQLSLPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLP
pt031202_POPTR_ MGVQETDPLAQLSLPPGFRFHPTDEELLVQYLCRKVAGHHFSMQIIGEIDLYKFDPWLLP
pt012347_POPTR_ MGVQETDPLAQLSLPPGFRFHPTDEELLVQYLCRKVAGHHFSMQIIGEIDLYKFDPWLLP
                **:** **************:******:*:*****.***.**:*:*.**********:**

AT3G15500.1     SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFY
pt031202_POPTR_ SKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITSDGRKVGIKKALVFY
pt012347_POPTR_ SKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITSDGRKVGIKKALVFY
                ***:**************************************:*:::**:**********

AT3G15500.1     IGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQTSAQKQAYNNLMTSGRE
pt031202_POPTR_ IGKAPKGTKTNWIMHEYRLIESSRKHGSTKLDEWVLCRIYKKKSIAAQKSMSGV--SSKE
pt012347_POPTR_ IGKAPKGTKTNWIMHEYRLIESSRKHGSTKLDEWVLCRIYKKKSIAAQKSMSGV--SSKE
                *********************.**::******:*********:: * ::: ..:  *.:*

AT3G15500.1     YSNNGSSTSSSSHQYDDVLESLHEIDNRSLGFAAGSSNALPHSHRPVLTNHKTGFQGLAR
pt031202_POPTR_ PSTNSPSSSFSSHFDDDVLDPLPEIDDRFLDLP--RTNSLKPRQHEEKINLATLGSG---
pt012347_POPTR_ PSTNSPSSSFSSHFDDDVLDPLPEIDDRFLDLP--RTNSLKPRHHEEKINLATLGSG---
                 *.*..*:* ***  ****:.* ***:* *.:.   :*:*   ::    *  *  .*   

AT3G15500.1     EPSFDWANLIGQNSVPELGLSHNVPSIRYGDGG---------------------------
pt031202_POPTR_ --SFDWATLAGLNSVPQ--LVQTQPCVSYSNSNVHDVYVPSMSQLCHMDTSAERMENLVE
pt012347_POPTR_ --SFDWATLAGLNSVPQ--LVQTQPC----------------------------------
                  *****.* * ****:  * :. *.                                  

AT3G15500.1     --------TQQQTEGIPR-FNNNSDVSANQGF--SVDPVNGFGYSGQQSSGFGFI-
pt031202_POPTR_ EEVQSGVRTRLDSVGNPVFFQQNSSVRP-QSFSNSFDPY-GLRHSIQPGSGFGFNQ
pt012347_POPTR_ --------------------------------------------------------
BoxShade v3.31 C (beta, 970507) Output
AT3G15500.1     M G L Q E L D P L A Q L S L P P G F R F Y P T D E E L M V E Y L C R K A A G H D F S L Q L I A E I D L Y K F D P W V L P
pt031202_POPTR_    M G V Q E T D P L A Q L S L P P G F R F H P T D E E L L V Q Y L C R K V A G H H F S M Q I I G E I D L Y K F D P W L L P
pt012347_POPTR_    M G V Q E T D P L A Q L S L P P G F R F H P T D E E L L V Q Y L C R K V A G H H F S M Q I I G E I D L Y K F D P W L L P
 
AT3G15500.1     S K A L F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K V I S T E G R R V G I K K A L V F Y
pt031202_POPTR_    S K A I F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I T S D G R K V G I K K A L V F Y
pt012347_POPTR_    S K A I F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I T S D G R K V G I K K A L V F Y
 
AT3G15500.1     I G K A P K G T K T N W I M H E Y R L I E P S R R N G S T K L D D W V L C R I Y K K Q T S A Q K Q A Y N N L M T S G R E
pt031202_POPTR_    I G K A P K G T K T N W I M H E Y R L I E S S R K H G S T K L D E W V L C R I Y K K K S I A A Q K S M S G V - - S S K E
pt012347_POPTR_    I G K A P K G T K T N W I M H E Y R L I E S S R K H G S T K L D E W V L C R I Y K K K S I A A Q K S M S G V - - S S K E
 
AT3G15500.1     Y S N N G S S T S S S S H Q Y D D V L E S L H E I D N R S L G F A A G S S N A L P H S H R P V L T N H K T G F Q G L A R
pt031202_POPTR_    P S T N S P S S S F S S H F D D D V L D P L P E I D D R F L D L P - - R T N S L K P R Q H E E K I N L A T L G S G - - -
pt012347_POPTR_    P S T N S P S S S F S S H F D D D V L D P L P E I D D R F L D L P - - R T N S L K P R H H E E K I N L A T L G S G - - -
 
AT3G15500.1     E P S F D W A N L I G Q N S V P E L G L S H N V P S I R Y G D G G - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt031202_POPTR_    - - S F D W A T L A G L N S V P Q - - L V Q T Q P C V S Y S N S N V H D V Y V P S M S Q L C H M D T S A E R M E N L V E
pt012347_POPTR_    - - S F D W A T L A G L N S V P Q - - L V Q T Q P C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G15500.1     - - - - - - - - T Q Q Q T E G I P R - F N N N S D V S A N Q G F - - S V D P V N G F G Y S G Q Q S S G F G F I -
pt031202_POPTR_    E E V Q S G V R T R L D S V G N P V F F Q Q N S S V R P - Q S F S N S F D P Y - G L R H S I Q P G S G F G F N Q
pt012347_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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