fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G15500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb019955 not found in 484aa AT5G08790.1 1st_not 0.408264462 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G15500.1     ------------------------------------------------------------
Sb019955_Sorbi1 TAETIHRTHRAEPPTIDSTQPPERELLYTAGRRNTGSQSRHRFYRPTDRCCRRLSGLSNQ
                                                                            

AT3G15500.1     ----MGL----QELDPLAQLSLPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLY
Sb019955_Sorbi1 PDQAMGLPVMRRERDAEAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLY
                    ***    :* *. *:*.*******:***:**: .********: :.: :***:***

AT3G15500.1     KFDPWVLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVG
Sb019955_Sorbi1 KFDPWDLPERALFGVREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLG
                ***** **.:**** :*****:**************.**.*******:** ::..** :*

AT3G15500.1     IKKALVFYIGKAPKGTKTNWIMHEYRLIEPSR----RNGSTKLDDWVLCRIYKKQTSAQK
Sb019955_Sorbi1 IKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAASKKGSLRLDDWVLCRLYNKKNEWEK
                ******** ****:*.**:******** :..*    ::** :********:*:*:.. :*

AT3G15500.1     QAYNNLMTSGREYSNNGSSTS-------SSSHQYDDVLESLHEIDNRSLGFAAGSSNALP
Sb019955_Sorbi1 ------MQLGKE-SAAGVGTAKEEAMDMTTSHSH---------------------SHSQS
                      *  *:* *  * .*:       ::**.:                     *:: .

AT3G15500.1     HSHRPVLTNHKTGFQGLAREPSFDWANLIGQNSVPEL----------GLSHNVPSIRYGD
Sb019955_Sorbi1 HSHS----------WGETRTPE---SEIVDNDPFPELDSFPAFQDPAAAMMMVPKKEQVD
                ***            * :* *.   ::::.::..***          .    **. .  *

AT3G15500.1     GGTQQQTEGIPRFNNNSDVSANQGFSVDPVNGFGYSGQQ---------------------
Sb019955_Sorbi1 DGSAAANAA-----KSSDLFVD--LSYDDIQGM-YSGLDMLPPPGEDFFSSLFASPRVKG
                .*:   . .     :.**: .:  :* * ::*: *** :                     

AT3G15500.1     -----SSGFGFI
Sb019955_Sorbi1 NQPAGAAGLGPF
                     ::*:* :
BoxShade v3.31 C (beta, 970507) Output
AT3G15500.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb019955_Sorbi1    T A E T I H R T H R A E P P T I D S T Q P P E R E L L Y T A G R R N T G S Q S R H R F Y R P T D R C C R R L S G L S N Q
 
AT3G15500.1     - - - - M G L - - - - Q E L D P L A Q L S L P P G F R F Y P T D E E L M V E Y L C R K A A G H D F S L Q L I A E I D L Y
Sb019955_Sorbi1    P D Q A M G L P V M R R E R D A E A E L N L P P G F R F H P T D D E L V E H Y L C R K A A G Q R L P V P I I A E V D L Y
 
AT3G15500.1     K F D P W V L P S K A L F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K V I S T E G R R V G
Sb019955_Sorbi1    K F D P W D L P E R A L F G V R E W Y F F T P R D R K Y P N G S R P N R A A G N G Y W K A T G A D K P V A P R G R T L G
 
AT3G15500.1     I K K A L V F Y I G K A P K G T K T N W I M H E Y R L I E P S R - - - - R N G S T K L D D W V L C R I Y K K Q T S A Q K
Sb019955_Sorbi1    I K K A L V F Y A G K A P R G V K T D W I M H E Y R L A D A G R A A A S K K G S L R L D D W V L C R L Y N K K N E W E K
 
AT3G15500.1     Q A Y N N L M T S G R E Y S N N G S S T S - - - - - - - S S S H Q Y D D V L E S L H E I D N R S L G F A A G S S N A L P
Sb019955_Sorbi1    - - - - - - M Q L G K E - S A A G V G T A K E E A M D M T T S H S H - - - - - - - - - - - - - - - - - - - - - S H S Q S
 
AT3G15500.1     H S H R P V L T N H K T G F Q G L A R E P S F D W A N L I G Q N S V P E L - - - - - - - - - - G L S H N V P S I R Y G D
Sb019955_Sorbi1    H S H S - - - - - - - - - - W G E T R T P E - - - S E I V D N D P F P E L D S F P A F Q D P A A A M M M V P K K E Q V D
 
AT3G15500.1     G G T Q Q Q T E G I P R F N N N S D V S A N Q G F S V D P V N G F G Y S G Q Q - - - - - - - - - - - - - - - - - - - - -
Sb019955_Sorbi1    D G S A A A N A A - - - - - K S S D L F V D - - L S Y D D I Q G M - Y S G L D M L P P P G E D F F S S L F A S P R V K G
 
AT3G15500.1     - - - - - S S G F G F I
Sb019955_Sorbi1    N Q P A G A A G L G P F
 
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