fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G15500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034443 not found in 345aa AT3G15500.1 not_1st 0.575206611 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G15500.1     MGLQELDPLAQLSLPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLP
gm034443_Glyma1 MGVPEKDPLSQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLPIIAEIDLYKFDPWVLP
                **: * ***:*****************:*:*****.***.*** :***************

AT3G15500.1     SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFY
gm034443_Glyma1 SKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFY
                ***:**************************************:*:****:**********

AT3G15500.1     IGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQTSAQKQAYNNLMTSGR-
gm034443_Glyma1 IGKAPKGTKTNWIMHEYRLLDSSRKNTGTKLDDWVLCRIYKKNSSAQKAVQNGVVPSNEH
                *******************::.**:* .**************::**** . *.::.*.. 

AT3G15500.1     -EYSNNGSSTSSSSHQYDDVLESLHEIDNRSLGFAAGSSNALPHSHRPVLTNHKTGFQGL
gm034443_Glyma1 TQYS-NGSSSSSSS-QLDDVLESLPAIDERC--FPMPRVNTLQQQQH----EEKVNVQNL
                 :** ****:**** * *******  **:*.  *.    *:* :.::    :.*...*.*

AT3G15500.1     AREPSFDWANLIGQNSVPEL---GLSHN--------------------VPSIRYGDGGTQ
gm034443_Glyma1 GEGGLLDWTNPSVLNSVVDFVSGNNNHNQLVQDQTQGMVNYNACNDLYVPTLCHVGTSVP
                ..   :**:*    *** ::   . .**                    **:: : . .. 

AT3G15500.1     QQTE-----GI--PRFNNNSDVSAN---QGF--SVDPVNGFGYSGQQSSGFGFI-
gm034443_Glyma1 QKMEEEVQSGVRNQRVQNNSWFLQNDFTQGFQNSVD-TSGFKYP-VQPVGFGFRN
                *: *     *:   *.:*** .  *   ***  *** ..** *.  *. ****
BoxShade v3.31 C (beta, 970507) Output
AT3G15500.1     M G L Q E L D P L A Q L S L P P G F R F Y P T D E E L M V E Y L C R K A A G H D F S L Q L I A E I D L Y K F D P W V L P
gm034443_Glyma1    M G V P E K D P L S Q L S L P P G F R F Y P T D E E L L V Q Y L C R K V A G H H F S L P I I A E I D L Y K F D P W V L P
 
AT3G15500.1     S K A L F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K V I S T E G R R V G I K K A L V F Y
gm034443_Glyma1    S K A I F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I T T E G R K V G I K K A L V F Y
 
AT3G15500.1     I G K A P K G T K T N W I M H E Y R L I E P S R R N G S T K L D D W V L C R I Y K K Q T S A Q K Q A Y N N L M T S G R -
gm034443_Glyma1    I G K A P K G T K T N W I M H E Y R L L D S S R K N T G T K L D D W V L C R I Y K K N S S A Q K A V Q N G V V P S N E H
 
AT3G15500.1     - E Y S N N G S S T S S S S H Q Y D D V L E S L H E I D N R S L G F A A G S S N A L P H S H R P V L T N H K T G F Q G L
gm034443_Glyma1    T Q Y S - N G S S S S S S S - Q L D D V L E S L P A I D E R C - - F P M P R V N T L Q Q Q Q H - - - - E E K V N V Q N L
 
AT3G15500.1     A R E P S F D W A N L I G Q N S V P E L - - - G L S H N - - - - - - - - - - - - - - - - - - - - V P S I R Y G D G G T Q
gm034443_Glyma1    G E G G L L D W T N P S V L N S V V D F V S G N N N H N Q L V Q D Q T Q G M V N Y N A C N D L Y V P T L C H V G T S V P
 
AT3G15500.1     Q Q T E - - - - - G I - - P R F N N N S D V S A N - - - Q G F - - S V D P V N G F G Y S G Q Q S S G F G F I -
gm034443_Glyma1    Q K M E E E V Q S G V R N Q R V Q N N S W F L Q N D F T Q G F Q N S V D - T S G F K Y P - V Q P V G F G F R N
 
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