fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G15540.1 GLEITELRLGLPGRDV at 11/197 in AT3G15540.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt028706 not found in 189aa AT3G15540.1 1st_1st 0.549504950 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G15540.1     MEKEGLGLEITELRLGLPGRDVAEKMMKKRAFTEMNMTSSGSNSDQCESGVVSSGGDAEK
pt028706_POPTR_ -MAQPLGLEITELRLGPPGSENGPKNEKKRVFSEL-------------SGEANSTTDGRK
                   : *********** ** : . *  ***.*:*:             ** ..*  *..*

AT3G15540.1     VNDSPAAKSQVVGWPPVCSYRKKNSCKEASTTKVGLGYVKVSMDGVPYLRKMDLGSSQGY
pt028706_POPTR_ TQTT----SQVVGWPPVCSYRKKNSFNEKDSHETSKIYVKVSMDGAPFLRKVDLGMHKEY
                .: :    ***************** :* .: :..  ********.*:***:***  : *

AT3G15540.1     DDLAFALDKLFGFRGIGVALKDGDNCEYVTIYEDKDGDWMLAGDVPWGMFLESCKRLRIM
pt028706_POPTR_ SDLVVALEKLFGCFGIGKALKDTDDCEYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIM
                .**..**:****  *** **** *:****.***********.***** **:*********

AT3G15540.1     KRSDATGFGLQPRGVDE----------
pt028706_POPTR_ KRSEAKGFGLQPRGALQQGNISKDDRD
                ***:*.********. :
BoxShade v3.31 C (beta, 970507) Output
AT3G15540.1     M E K E G L G L E I T E L R L G L P G R D V A E K M M K K R A F T E M N M T S S G S N S D Q C E S G V V S S G G D A E K
pt028706_POPTR_    - M A Q P L G L E I T E L R L G P P G S E N G P K N E K K R V F S E L - - - - - - - - - - - - - S G E A N S T T D G R K
 
AT3G15540.1     V N D S P A A K S Q V V G W P P V C S Y R K K N S C K E A S T T K V G L G Y V K V S M D G V P Y L R K M D L G S S Q G Y
pt028706_POPTR_    T Q T T - - - - S Q V V G W P P V C S Y R K K N S F N E K D S H E T S K I Y V K V S M D G A P F L R K V D L G M H K E Y
 
AT3G15540.1     D D L A F A L D K L F G F R G I G V A L K D G D N C E Y V T I Y E D K D G D W M L A G D V P W G M F L E S C K R L R I M
pt028706_POPTR_    S D L V V A L E K L F G C F G I G K A L K D T D D C E Y V P I Y E D K D G D W M L V G D V P W E M F I E S C K R L R I M
 
AT3G15540.1     K R S D A T G F G L Q P R G V D E - - - - - - - - - -
pt028706_POPTR_    K R S E A K G F G L Q P R G A L Q Q G N I S K D D R D
 
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