fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G16280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm021960 not found in 251aa AT5G11590.1 1st_not 0.478873239 II
Pt005791 not found in 257aa AT5G11590.1 1st_not 0.461267605 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G16280.1     -----------------------MTSLNSSASPTSSSSDQSDATTTTSTHLSEEEAPPRN
pt005791_POPTR_ -----------------------MSDHQQQNLETESSSTKAFSPPSPS-SPSSNSNPSKK
gm021960_Glyma0 MCLGLQETKNIPTILNFTHLQITMTQQATTSSETTTSSSSSSSSSSSTFSPSQHSGPKAQ
                                       *:.       * :** .: :..:.:   *... *  :

AT3G16280.1     NN---------TRKRRRDSSSASSSSSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLG
pt005791_POPTR_ HQQDQDFSPCKKITRIRDSS--------KHPVYRGVRMRNWGKWVSEIREPRKKSRIWLG
gm021960_Glyma0 AQ--------KQSKRPRDCS--------KHPVYHGVRKRNWGKWVSEIREPRKKSRIWLG
                 :           .* **.*        :****:*** *.*********:****:*****

AT3G16280.1     TFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVVEE
pt005791_POPTR_ TFPTPEKAARAHDAAALSIKGNSAILNFPELANSLPRPASLAPRDVQAAAAKAAQMDNFD
gm021960_Glyma0 TFATPEMAARAHDVAALTIKGESAILNFPEIADLLPRPVTCAPRDIQAAATAAASMVKFD
                ** *.: ******.***:***.**:*****:*. :***.: :*:*:*:**: ** *   :

AT3G16280.1     KLLEKDEAPEAPPSSES---------SYVAAESEDEERLEKIVELPNIEEGSYDESVTSR
pt005791_POPTR_ QKSETTTT-TTASSSSSCTSSLTSLVSLMDLSSQDEE-LSEIVELPSLE-TSYDE-LNN-
gm021960_Glyma0 PVTQSSDS-ETPESS---------------------E-LSEIVELPNIEDSSFDS-VDSR
                   :.  :  :. **                     * *.:*****.:*  *:*. : . 

AT3G16280.1     ADLAYSEPFDCWVYPPV-MDFYEEI---------------------SEFNFVELWSFNH
pt005791_POPTR_ -DFVYSDSVYGWMYPPPWMQSVENICLSGGGVGENTTTTAGLISILKQAEAFKNW----
gm021960_Glyma0 PEFVLVDVVDGWVFPPMGMGS-EGIEICAAFSDELFPQQ----SFVDEIEILPIWD---
                 ::.  : .  *::**  *   * *                     .: : .  *
BoxShade v3.31 C (beta, 970507) Output
AT3G16280.1     - - - - - - - - - - - - - - - - - - - - - - - M T S L N S S A S P T S S S S D Q S D A T T T T S T H L S E E E A P P R N
pt005791_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - M S D H Q Q Q N L E T E S S S T K A F S P P S P S - S P S S N S N P S K K
gm021960_Glyma0    M C L G L Q E T K N I P T I L N F T H L Q I T M T Q Q A T T S S E T T T S S S S S S S S S S S T F S P S Q H S G P K A Q
 
AT3G16280.1     N N - - - - - - - - - T R K R R R D S S S A S S S S S M Q H P V Y R G V R M R S W G K W V S E I R Q P R K K T R I W L G
pt005791_POPTR_    H Q Q D Q D F S P C K K I T R I R D S S - - - - - - - - K H P V Y R G V R M R N W G K W V S E I R E P R K K S R I W L G
gm021960_Glyma0    A Q - - - - - - - - K Q S K R P R D C S - - - - - - - - K H P V Y H G V R K R N W G K W V S E I R E P R K K S R I W L G
 
AT3G16280.1     T F V T A D M A A R A H D V A A L T I K G S S A V L N F P E L A S L F P R P A S S S P H D I Q T A A A E A A A M V V E E
pt005791_POPTR_    T F P T P E K A A R A H D A A A L S I K G N S A I L N F P E L A N S L P R P A S L A P R D V Q A A A A K A A Q M D N F D
gm021960_Glyma0    T F A T P E M A A R A H D V A A L T I K G E S A I L N F P E I A D L L P R P V T C A P R D I Q A A A T A A A S M V K F D
 
AT3G16280.1     K L L E K D E A P E A P P S S E S - - - - - - - - - S Y V A A E S E D E E R L E K I V E L P N I E E G S Y D E S V T S R
pt005791_POPTR_    Q K S E T T T T - T T A S S S S S C T S S L T S L V S L M D L S S Q D E E - L S E I V E L P S L E - T S Y D E - L N N -
gm021960_Glyma0    P V T Q S S D S - E T P E S S - - - - - - - - - - - - - - - - - - - - - E - L S E I V E L P N I E D S S F D S - V D S R
 
AT3G16280.1     A D L A Y S E P F D C W V Y P P V - M D F Y E E I - - - - - - - - - - - - - - - - - - - - - S E F N F V E L W S F N H
pt005791_POPTR_    - D F V Y S D S V Y G W M Y P P P W M Q S V E N I C L S G G G V G E N T T T T A G L I S I L K Q A E A F K N W - - - -
gm021960_Glyma0    P E F V L V D V V D G W V F P P M G M G S - E G I E I C A A F S D E L F P Q Q - - - - S F V D E I E I L P I W D - - -
 
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