fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G16280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt008221 not found in 250aa AT5G11590.1 not_not 0.454225352 III
Pt029396 not found in 233aa AT5G25810.1 not_not 0.454225352 III
Pt011904 not found in 231aa AT5G25810.1 not_not 0.454225352 III
Pt010682 not found in 225aa AT4G16750.1 not_not 0.404929577 III
Pt029884 not found in 252aa AT2G44940.1 not_not 0.404929577 III
Pt008334 not found in 293aa AT1G77200.1 not_not 0.401408450 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G16280.1     -------MTSLNSSASPTS---------SSSDQSDATTTTSTHL----SEEEAPP-RNNN
pt008334_POPTR_ --MTVSPVSNSNSDTDSTSTYSSSLQALSSSSSSGLSPNPVSK-----PDPEENP--RKP
pt008221_POPTR_ ----MSDHHQQNSETESSSTNSLS----PASPSSPLSNSTQSKKP--LKDQDFSP-SKKI
pt011904_POPTR_ --------MNEESTSSSNS----T----CNSPPPSLATTITNKL------NKQNP-IQQS
pt029884_POPTR_ METSLNIQCDAQTSAFSSSSITSS----FSSFPSPMKNSRKQDQSQDSSKRNQDPKNNNE
pt010682_POPTR_ -----------------------------------MKDSTKQ-VSQNSSKRNQDP-NNYE
pt029396_POPTR_ -------MTKEESSNRSCSSICTT----SSSSSSSFATTITNKL------KKQNP-VDQK
                                                      .            .  *     

AT3G16280.1     TRKRRRDSSSASSSSSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARA
pt008334_POPTR_ KR--PRESTSTSSNSNSKHPVFRGVRMRTWGKWVSEIREPRKKNRIWLGTFSTPEMAARA
pt008221_POPTR_ KR--IRDS--------NKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARA
pt011904_POPTR_ SRSKVRDC--------SKHPVYRGVRRRAWGKWVSEIRQPRKKSRIWLGTFPTPEMAARA
pt029884_POPTR_ SNKKAKSGGNA-----GRHPSYRGVRMRQWGKWVSEIRQPKKKSRIWLGTFPTPEMAARA
pt010682_POPTR_ SDKQAKRRGNA-----GRHPSYRGVRMRQWGKWVSEIRQPKKKSRIWLGTFSTPEMAARA
pt029396_POPTR_ SR-KARDC--------SKHAVYRGVRRRAWGKWVSEIRQPRKKSRIWLGTFPTPEMAARA
                .    :           :*. :**** * *********:*:**.******* *.:*****

AT3G16280.1     HDVAALTIKGSSAVLNFPELASLFPRPASSSPHDIQTAAAEAAAMV------VEEKLLEK
pt008334_POPTR_ HDVAALSIKGNSAILNFPKLAGSLPRPASNSPRDVQAAAAKAASMDFNIVPSAPTKVCDD
pt008221_POPTR_ HDVAALSIKGNPAILNFPELANYLPRPASLAPRDVQAAAAKAAQMD--------------
pt011904_POPTR_ HDVAALCIKGDSAILNFPELADSLPRPVSVMPRDIQSAAAKAAAMV--------------
pt029884_POPTR_ HDVAALTIKGHSAHLNFPELAHEFPRPASSSPKDIQAAAALAATLS--------------
pt010682_POPTR_ HDVAALTIKGHSAHLNFPELAHEFPRPASSSPKDIQAAAALAATLS--------------
pt029396_POPTR_ HDVAALSIKGDSAILNFPELAASLPRPVSLMPRDIQAAAAKAAAMV--------------
                ****** *** .* ****:**  :***.*  *:*:*:*** ** :               

AT3G16280.1     ----------------------DEAPEAPPSSESSYVAA--ESED----EER-LEKIVEL
pt008334_POPTR_ ENNSNSNDSTASNNNRSSSSLVTQSSSSPSSSSTAEVTS--SPSDVAT-PEE-LSEIVEL
pt008221_POPTR_ -----------QFDQKSE----TTTTTSPSSSSTSSLTSLVSLMDLSSQEEE-LCEIVEL
pt011904_POPTR_ ----------------------EFNSPSPSSSLSSSSVT--VSEDVAESEEEYLSEIVEL
pt029884_POPTR_ -------CKTSPKGRETEAEDELMLPHSPDSTLASNETQEYSLSSPLRDDGD--DTFIDL
pt010682_POPTR_ -------CKTSQKGRETEAEAELMLPRSLDSTLASNETQEYSLNSPLRDDDD--DTFIDL
pt029396_POPTR_ ----------------------DFNSSSPPSSLSSSSVS--VSEDVAESEEEYLSEIVEL
                                         . :  *: ::  .      .           :::*

AT3G16280.1     PNIEEG---SYDESVTSRADLAYSEPFD--CWVYPPVMDFY-------------------
pt008334_POPTR_ PSL-ET---NLEEFP----EFVLLG--D--SWPYNINQSWYCEDYGAVGTGYFSDQYLSI
pt008221_POPTR_ PSL-ET---SYDELSN---DFVYFDSID--EWMYPPPWMQSMENHCCGGGGGCACDDFTL
pt011904_POPTR_ PNI-EG---SFDSPDQSRIEFMLFDSVDGHGWVYPPLDL----------CGEFSDQLLGL
pt029884_POPTR_ PDILQD-QYQFD-------EFCYLS-----SW-----------------------QLVGP
pt010682_POPTR_ PDILQGISHQFD-------EFCYLS-----PW-----------------------QPVGT
pt029396_POPTR_ PNI-EG---SFDSPDQSQTEFMLFDSVD--RWVYPPLDL----------SGEFCDQLLGL
                *.: :    . :       ::          *                            

AT3G16280.1     --EEISEFNF----VELWSFNH---------------
pt008334_POPTR_ IPESNVITTTGAFETSLWEH-----------------
pt008221_POPTR_ PNESTV----------LWDY-----------------
pt011904_POPTR_ --ESLISSNLAGSVLN---------------------
pt029884_POPTR_ --ET--------SDIGFWHQEEP-------FGNIPFK
pt010682_POPTR_ --ET--------SDVGFWHHEEPSLWEYQSSRNIY--
pt029396_POPTR_ --ESLIPSNFGGSELN---------------------
                  *
BoxShade v3.31 C (beta, 970507) Output
AT3G16280.1     - - - - - - - M T S L N S S A S P T S - - - - - - - - - S S S D Q S D A T T T T S T H L - - - - S E E E A P P - R N N N
pt008334_POPTR_    - - M T V S P V S N S N S D T D S T S T Y S S S L Q A L S S S S S S G L S P N P V S K - - - - - P D P E E N P - - R K P
pt008221_POPTR_    - - - - M S D H H Q Q N S E T E S S S T N S L S - - - - P A S P S S P L S N S T Q S K K P - - L K D Q D F S P - S K K I
pt011904_POPTR_    - - - - - - - - M N E E S T S S S N S - - - - T - - - - C N S P P P S L A T T I T N K L - - - - - - N K Q N P - I Q Q S
pt029884_POPTR_    M E T S L N I Q C D A Q T S A F S S S S I T S S - - - - F S S F P S P M K N S R K Q D Q S Q D S S K R N Q D P K N N N E
pt010682_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M K D S T K Q - V S Q N S S K R N Q D P - N N Y E
pt029396_POPTR_    - - - - - - - M T K E E S S N R S C S S I C T T - - - - S S S S S S S F A T T I T N K L - - - - - - K K Q N P - V D Q K
 
AT3G16280.1     T R K R R R D S S S A S S S S S M Q H P V Y R G V R M R S W G K W V S E I R Q P R K K T R I W L G T F V T A D M A A R A
pt008334_POPTR_    K R - - P R E S T S T S S N S N S K H P V F R G V R M R T W G K W V S E I R E P R K K N R I W L G T F S T P E M A A R A
pt008221_POPTR_    K R - - I R D S - - - - - - - - N K H P V Y R G V R M R N W G K W V S E I R E P R K K S R I W L G T F P T P E M A A R A
pt011904_POPTR_    S R S K V R D C - - - - - - - - S K H P V Y R G V R R R A W G K W V S E I R Q P R K K S R I W L G T F P T P E M A A R A
pt029884_POPTR_    S N K K A K S G G N A - - - - - G R H P S Y R G V R M R Q W G K W V S E I R Q P K K K S R I W L G T F P T P E M A A R A
pt010682_POPTR_    S D K Q A K R R G N A - - - - - G R H P S Y R G V R M R Q W G K W V S E I R Q P K K K S R I W L G T F S T P E M A A R A
pt029396_POPTR_    S R - K A R D C - - - - - - - - S K H A V Y R G V R R R A W G K W V S E I R Q P R K K S R I W L G T F P T P E M A A R A
 
AT3G16280.1     H D V A A L T I K G S S A V L N F P E L A S L F P R P A S S S P H D I Q T A A A E A A A M V - - - - - - V E E K L L E K
pt008334_POPTR_    H D V A A L S I K G N S A I L N F P K L A G S L P R P A S N S P R D V Q A A A A K A A S M D F N I V P S A P T K V C D D
pt008221_POPTR_    H D V A A L S I K G N P A I L N F P E L A N Y L P R P A S L A P R D V Q A A A A K A A Q M D - - - - - - - - - - - - - -
pt011904_POPTR_    H D V A A L C I K G D S A I L N F P E L A D S L P R P V S V M P R D I Q S A A A K A A A M V - - - - - - - - - - - - - -
pt029884_POPTR_    H D V A A L T I K G H S A H L N F P E L A H E F P R P A S S S P K D I Q A A A A L A A T L S - - - - - - - - - - - - - -
pt010682_POPTR_    H D V A A L T I K G H S A H L N F P E L A H E F P R P A S S S P K D I Q A A A A L A A T L S - - - - - - - - - - - - - -
pt029396_POPTR_    H D V A A L S I K G D S A I L N F P E L A A S L P R P V S L M P R D I Q A A A A K A A A M V - - - - - - - - - - - - - -
 
AT3G16280.1     - - - - - - - - - - - - - - - - - - - - - - D E A P E A P P S S E S S Y V A A - - E S E D - - - - E E R - L E K I V E L
pt008334_POPTR_    E N N S N S N D S T A S N N N R S S S S L V T Q S S S S P S S S S T A E V T S - - S P S D V A T - P E E - L S E I V E L
pt008221_POPTR_    - - - - - - - - - - - Q F D Q K S E - - - - T T T T T S P S S S S T S S L T S L V S L M D L S S Q E E E - L C E I V E L
pt011904_POPTR_    - - - - - - - - - - - - - - - - - - - - - - E F N S P S P S S S L S S S S V T - - V S E D V A E S E E E Y L S E I V E L
pt029884_POPTR_    - - - - - - - C K T S P K G R E T E A E D E L M L P H S P D S T L A S N E T Q E Y S L S S P L R D D G D - - D T F I D L
pt010682_POPTR_    - - - - - - - C K T S Q K G R E T E A E A E L M L P R S L D S T L A S N E T Q E Y S L N S P L R D D D D - - D T F I D L
pt029396_POPTR_    - - - - - - - - - - - - - - - - - - - - - - D F N S S S P P S S L S S S S V S - - V S E D V A E S E E E Y L S E I V E L
 
AT3G16280.1     P N I E E G - - - S Y D E S V T S R A D L A Y S E P F D - - C W V Y P P V M D F Y - - - - - - - - - - - - - - - - - - -
pt008334_POPTR_    P S L - E T - - - N L E E F P - - - - E F V L L G - - D - - S W P Y N I N Q S W Y C E D Y G A V G T G Y F S D Q Y L S I
pt008221_POPTR_    P S L - E T - - - S Y D E L S N - - - D F V Y F D S I D - - E W M Y P P P W M Q S M E N H C C G G G G G C A C D D F T L
pt011904_POPTR_    P N I - E G - - - S F D S P D Q S R I E F M L F D S V D G H G W V Y P P L D L - - - - - - - - - - C G E F S D Q L L G L
pt029884_POPTR_    P D I L Q D - Q Y Q F D - - - - - - - E F C Y L S - - - - - S W - - - - - - - - - - - - - - - - - - - - - - - Q L V G P
pt010682_POPTR_    P D I L Q G I S H Q F D - - - - - - - E F C Y L S - - - - - P W - - - - - - - - - - - - - - - - - - - - - - - Q P V G T
pt029396_POPTR_    P N I - E G - - - S F D S P D Q S Q T E F M L F D S V D - - R W V Y P P L D L - - - - - - - - - - S G E F C D Q L L G L
 
AT3G16280.1     - - E E I S E F N F - - - - V E L W S F N H - - - - - - - - - - - - - - -
pt008334_POPTR_    I P E S N V I T T T G A F E T S L W E H - - - - - - - - - - - - - - - - -
pt008221_POPTR_    P N E S T V - - - - - - - - - - L W D Y - - - - - - - - - - - - - - - - -
pt011904_POPTR_    - - E S L I S S N L A G S V L N - - - - - - - - - - - - - - - - - - - - -
pt029884_POPTR_    - - E T - - - - - - - - S D I G F W H Q E E P - - - - - - - F G N I P F K
pt010682_POPTR_    - - E T - - - - - - - - S D V G F W H H E E P S L W E Y Q S S R N I Y - -
pt029396_POPTR_    - - E S L I P S N F G G S E L N - - - - - - - - - - - - - - - - - - - - -
 
0