fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G16350.1 SSSAVKLFGVRLTDG at 47/387 in AT3G16350.1
KSYLPSLELSLNNTTE at 235/387 in AT3G16350.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os000774 GGGGVRLFGVRLTSP in 31/366 AT3G16350.1 1st_1st 0.361774744 Ib
SIEPSALSLQLTGPTN in 328/366
Sb024608 SGGGVRLFGVRLTTA in 73/407 AT3G16350.1 1st_1st 0.366894197 Ib
SMEPTALSLQLIGSTD in 369/407
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G16350.1     ----------------------------------------------MTRRCSHCSNNGHN
Os000774_Os01t0 ----------------------------------------------MTRRCSHCSNNGHN
Sb024608_Sorbi1 GKKREGEGGEQPRAHGVAFGTLAARRTYEPVASARVARTRASPPERMTRRCSHCSNNGHN
                                                              **************

AT3G16350.1     SRTCPTRGGGTCGGSGGGGGGGGGGGSGSSSAVKLFGVRLTDG---SIIKKSASMGNL-S
Os000774_Os01t0 ARTCPARG-----------GGGGGGG------VRLFGVRLTSPPE-VAMKKSASMSCIAS
Sb024608_Sorbi1 SRTCPAR---------------SGGG------VRLFGVRLTTAPAPAAMKKSASMSCIAS
                :****:*               .***      *:*******       :******. : *

AT3G16350.1     ALAVAAAAATHHRLSPSSPLATSNLNDSPLSDHARYSNLHHNEGYLSDDPAHGSGSSHRR
Os000774_Os01t0 SLGSGGGSGG------SSPAGTGRGGG-GGGEGA--------AGYASDDPTHASCSTNGR
Sb024608_Sorbi1 SL--GGGSGG------SSPPAGGVGGGRGGGDGG--------AGYVSDDPGHASCSTNGR
                :*  ...:.       *** . .  ..   .: .         ** **** *.* *:: *

AT3G16350.1     GERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASHAQKYFIRHTSSS
Os000774_Os01t0 GERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSS
Sb024608_Sorbi1 VERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSS
                 ***:*.********:**:****************:*.*****************:*.**

AT3G16350.1     RRKRRSSLFDMVTDEMVTDSSP----------TQEEQTLNGSSP------SKEPEKKSYL
Os000774_Os01t0 RRKRRSSLFDMVP-EMPMDESPVVVEQLMLHSTQDEATSSNQLPISHLVKQKEPEFARHL
Sb024608_Sorbi1 RRKRRSSLFDMVA-EMPVDESLAAAEQITIQNTQDEAASSNQLPTLHLGHQKEAEFAKQM
                ************. **  *.*           **:* : ... *      .**.*    :

AT3G16350.1     PSLELSLNNTTEAEEVVATAPRQEKSQEAIEPSNGVSPMLVPGGFFPPCFPVTYTIWLPA
Os000774_Os01t0 SDLQLRKHEESEFTEPSLAALDLEMNHAA--PFKTKFVLTMP-TFYPALIPVPLTLWPP-
Sb024608_Sorbi1 PTFQLRQHEESEYAEPSLTLPDLEMNSSV--PFNTIAVPTMP-AFYPALVPVPLTLWPP-
                . ::*  :: :*  *   :    * .  .  * :      :*  *:*. .**. *:* * 

AT3G16350.1     SLHGTEHALNAETSSQQHQVLKPKPGFAKERV-NMDELVGMSQLSIGMATRHETETSPSP
Os000774_Os01t0 ------NVANVGESGTNHEILKPTPVNGKEVINKADEVVGMSKLTIGDGSSNSIE--PSA
Sb024608_Sorbi1 ------SVAHVEDAGTTHEILKPTPLNGKEVI-KADDVVGMSKLSIGEASSGSME--PTA
                       . :.  :.  *::***.*  .** : : *::****:*:** .:  . *  *:.

AT3G16350.1     LSLRL---EPSRPSAFHSNGSVNGADLSKGNSA-IQAI
Os000774_Os01t0 LSLQLTGPTNTRQSAFHVNPPMAGPDLNKRNNSPIHAV
Sb024608_Sorbi1 LSLQLIGSTDTRQSAFHVSPPMNRPELSKRNSSPIHAV
                ***:*     :* **** . .:  .:*.* *.: *:*:
BoxShade v3.31 C (beta, 970507) Output
AT3G16350.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M T R R C S H C S N N G H N
Os000774_Os01t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M T R R C S H C S N N G H N
Sb024608_Sorbi1    G K K R E G E G G E Q P R A H G V A F G T L A A R R T Y E P V A S A R V A R T R A S P P E R M T R R C S H C S N N G H N
 
AT3G16350.1     S R T C P T R G G G T C G G S G G G G G G G G G G G S G S S S A V K L F G V R L T D G - - - S I I K K S A S M G N L - S
Os000774_Os01t0    A R T C P A R G - - - - - - - - - - - G G G G G G G - - - - - - V R L F G V R L T S P P E - V A M K K S A S M S C I A S
Sb024608_Sorbi1    S R T C P A R - - - - - - - - - - - - - - - S G G G - - - - - - V R L F G V R L T T A P A P A A M K K S A S M S C I A S
 
AT3G16350.1     A L A V A A A A A T H H R L S P S S P L A T S N L N D S P L S D H A R Y S N L H H N E G Y L S D D P A H G S G S S H R R
Os000774_Os01t0    S L G S G G G S G G - - - - - - S S P A G T G R G G G - G G G E G A - - - - - - - - A G Y A S D D P T H A S C S T N G R
Sb024608_Sorbi1    S L - - G G G S G G - - - - - - S S P P A G G V G G G R G G G D G G - - - - - - - - A G Y V S D D P G H A S C S T N G R
 
AT3G16350.1     G E R K R G V P W T E E E H R L F L V G L Q K L G K G D W R G I S R N Y V T S R T P T Q V A S H A Q K Y F I R H T S S S
Os000774_Os01t0    G E R K K G T P W T E E E H R M F L M G L Q K L G K G D W R G I S R N F V V S R T P T Q V A S H A Q K Y F I R Q T N S S
Sb024608_Sorbi1    V E R K K G T P W T E E E H R M F L M G L Q K L G K G D W R G I S R N F V V S R T P T Q V A S H A Q K Y F I R Q T N S S
 
AT3G16350.1     R R K R R S S L F D M V T D E M V T D S S P - - - - - - - - - - T Q E E Q T L N G S S P - - - - - - S K E P E K K S Y L
Os000774_Os01t0    R R K R R S S L F D M V P - E M P M D E S P V V V E Q L M L H S T Q D E A T S S N Q L P I S H L V K Q K E P E F A R H L
Sb024608_Sorbi1    R R K R R S S L F D M V A - E M P V D E S L A A A E Q I T I Q N T Q D E A A S S N Q L P T L H L G H Q K E A E F A K Q M
 
AT3G16350.1     P S L E L S L N N T T E A E E V V A T A P R Q E K S Q E A I E P S N G V S P M L V P G G F F P P C F P V T Y T I W L P A
Os000774_Os01t0    S D L Q L R K H E E S E F T E P S L A A L D L E M N H A A - - P F K T K F V L T M P - T F Y P A L I P V P L T L W P P -
Sb024608_Sorbi1    P T F Q L R Q H E E S E Y A E P S L T L P D L E M N S S V - - P F N T I A V P T M P - A F Y P A L V P V P L T L W P P -
 
AT3G16350.1     S L H G T E H A L N A E T S S Q Q H Q V L K P K P G F A K E R V - N M D E L V G M S Q L S I G M A T R H E T E T S P S P
Os000774_Os01t0    - - - - - - N V A N V G E S G T N H E I L K P T P V N G K E V I N K A D E V V G M S K L T I G D G S S N S I E - - P S A
Sb024608_Sorbi1    - - - - - - S V A H V E D A G T T H E I L K P T P L N G K E V I - K A D D V V G M S K L S I G E A S S G S M E - - P T A
 
AT3G16350.1     L S L R L - - - E P S R P S A F H S N G S V N G A D L S K G N S A - I Q A I
Os000774_Os01t0    L S L Q L T G P T N T R Q S A F H V N P P M A G P D L N K R N N S P I H A V
Sb024608_Sorbi1    L S L Q L I G S T D T R Q S A F H V S P P M N R P E L S K R N S S P I H A V
 
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