Input
| Putative repression domain
|
|
AT3G16350.1 |
SSSAVKLFGVRLTDG at 47/387 in AT3G16350.1 |
|
KSYLPSLELSLNNTTE at 235/387 in AT3G16350.1 |
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Os000774 |
GGGGVRLFGVRLTSP in 31/366 |
AT3G16350.1 |
1st_1st |
0.361774744 |
Ib |
SIEPSALSLQLTGPTN in 328/366 |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT3G16350.1 MTRRCSHCSNNGHNSRTCPTRGGGTCGGSGGGGGGGGGGGSGSSSAVKLFGVRLTDGS--
Os000774_Os01t0 MTRRCSHCSNNGHNARTCPAR-----------GGGGGGGG------VRLFGVRLTSPPEV
**************:****:* ******** *:*******. .
AT3G16350.1 IIKKSASMGNLSALAVAAAAATHHRLSPSSPLATSNLNDSPLSDHARYSNLHHNEGYLSD
Os000774_Os01t0 AMKKSASMS-----CIASSLGSGGGSGGSSPAGTGRGGGGGGEGAA---------GYASD
:******. .:*:: .: . *** .*.. ... .. * ** **
AT3G16350.1 DPAHGSGSSHRRGERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASH
Os000774_Os01t0 DPTHASCSTNGRGERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASH
**:*.* *:: *****:*.********:**:****************:*.**********
AT3G16350.1 AQKYFIRHTSSSRRKRRSSLFDMVTDEMVTDSSP----------TQEEQTLNGSSP----
Os000774_Os01t0 AQKYFIRQTNSSRRKRRSSLFDMVP-EMPMDESPVVVEQLMLHSTQDEATSSNQLPISHL
*******:*.**************. ** *.** **:* * ... *
AT3G16350.1 --SKEPEKKSYLPSLELSLNNTTEAEEVVATAPRQEKSQEAIEPS--------NGVSP--
Os000774_Os01t0 VKQKEPEFARHLSDLQL----------------RKHEESEFTEPSLAALDLEMNHAAPFK
.**** :*..*:* *:.:..* *** * .:*
AT3G16350.1 ---MLVPGGFFPPCFPVTYTIWLPASLHGTEHALNAETSSQQHQVLKPKPGFAKERVN-M
Os000774_Os01t0 TKFVLTMPTFYPALIPVPLTLWPP-------NVANVGESGTNHEILKPTPVNGKEVINKA
:*. *:*. :**. *:* * :. *. *. :*::***.* .** :*
AT3G16350.1 DELVGMSQLSIGMATRHETETSPSPLSLRLE-P--SRPSAFHSNGSVNGADLSK-GNSAI
Os000774_Os01t0 DEVVGMSKLTIGDGSSNSIE--PSALSLQLTGPTNTRQSAFHVNPPMAGPDLNKRNNSPI
**:****:*:** .: :. * **.***:* * :* **** * .: *.**.* .**.*
AT3G16350.1 QAI
Os000774_Os01t0 HAV
:*:
BoxShade v3.31 C (beta, 970507) Output
AT3G16350.1 |
M |
T |
R |
R |
C |
S |
H |
C |
S |
N |
N |
G |
H |
N |
S |
R |
T |
C |
P |
T |
R |
G |
G |
G |
T |
C |
G |
G |
S |
G |
G |
G |
G |
G |
G |
G |
G |
G |
G |
G |
S |
G |
S |
S |
S |
A |
V |
K |
L |
F |
G |
V |
R |
L |
T |
D |
G |
S |
- |
- |
Os000774_Os01t0 |
M |
T |
R |
R |
C |
S |
H |
C |
S |
N |
N |
G |
H |
N |
A |
R |
T |
C |
P |
A |
R |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
G |
G |
G |
G |
G |
G |
G |
G |
- |
- |
- |
- |
- |
- |
V |
R |
L |
F |
G |
V |
R |
L |
T |
S |
P |
P |
E |
V |
|
AT3G16350.1 |
I |
I |
K |
K |
S |
A |
S |
M |
G |
N |
L |
S |
A |
L |
A |
V |
A |
A |
A |
A |
A |
T |
H |
H |
R |
L |
S |
P |
S |
S |
P |
L |
A |
T |
S |
N |
L |
N |
D |
S |
P |
L |
S |
D |
H |
A |
R |
Y |
S |
N |
L |
H |
H |
N |
E |
G |
Y |
L |
S |
D |
Os000774_Os01t0 |
A |
M |
K |
K |
S |
A |
S |
M |
S |
- |
- |
- |
- |
- |
C |
I |
A |
S |
S |
L |
G |
S |
G |
G |
G |
S |
G |
G |
S |
S |
P |
A |
G |
T |
G |
R |
G |
G |
G |
G |
G |
G |
E |
G |
A |
A |
- |
- |
- |
- |
- |
- |
- |
- |
- |
G |
Y |
A |
S |
D |
|
AT3G16350.1 |
D |
P |
A |
H |
G |
S |
G |
S |
S |
H |
R |
R |
G |
E |
R |
K |
R |
G |
V |
P |
W |
T |
E |
E |
E |
H |
R |
L |
F |
L |
V |
G |
L |
Q |
K |
L |
G |
K |
G |
D |
W |
R |
G |
I |
S |
R |
N |
Y |
V |
T |
S |
R |
T |
P |
T |
Q |
V |
A |
S |
H |
Os000774_Os01t0 |
D |
P |
T |
H |
A |
S |
C |
S |
T |
N |
G |
R |
G |
E |
R |
K |
K |
G |
T |
P |
W |
T |
E |
E |
E |
H |
R |
M |
F |
L |
M |
G |
L |
Q |
K |
L |
G |
K |
G |
D |
W |
R |
G |
I |
S |
R |
N |
F |
V |
V |
S |
R |
T |
P |
T |
Q |
V |
A |
S |
H |
|
AT3G16350.1 |
A |
Q |
K |
Y |
F |
I |
R |
H |
T |
S |
S |
S |
R |
R |
K |
R |
R |
S |
S |
L |
F |
D |
M |
V |
T |
D |
E |
M |
V |
T |
D |
S |
S |
P |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
T |
Q |
E |
E |
Q |
T |
L |
N |
G |
S |
S |
P |
- |
- |
- |
- |
Os000774_Os01t0 |
A |
Q |
K |
Y |
F |
I |
R |
Q |
T |
N |
S |
S |
R |
R |
K |
R |
R |
S |
S |
L |
F |
D |
M |
V |
P |
- |
E |
M |
P |
M |
D |
E |
S |
P |
V |
V |
V |
E |
Q |
L |
M |
L |
H |
S |
T |
Q |
D |
E |
A |
T |
S |
S |
N |
Q |
L |
P |
I |
S |
H |
L |
|
AT3G16350.1 |
- |
- |
S |
K |
E |
P |
E |
K |
K |
S |
Y |
L |
P |
S |
L |
E |
L |
S |
L |
N |
N |
T |
T |
E |
A |
E |
E |
V |
V |
A |
T |
A |
P |
R |
Q |
E |
K |
S |
Q |
E |
A |
I |
E |
P |
S |
- |
- |
- |
- |
- |
- |
- |
- |
N |
G |
V |
S |
P |
- |
- |
Os000774_Os01t0 |
V |
K |
Q |
K |
E |
P |
E |
F |
A |
R |
H |
L |
S |
D |
L |
Q |
L |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
R |
K |
H |
E |
E |
S |
E |
F |
T |
E |
P |
S |
L |
A |
A |
L |
D |
L |
E |
M |
N |
H |
A |
A |
P |
F |
K |
|
AT3G16350.1 |
- |
- |
- |
M |
L |
V |
P |
G |
G |
F |
F |
P |
P |
C |
F |
P |
V |
T |
Y |
T |
I |
W |
L |
P |
A |
S |
L |
H |
G |
T |
E |
H |
A |
L |
N |
A |
E |
T |
S |
S |
Q |
Q |
H |
Q |
V |
L |
K |
P |
K |
P |
G |
F |
A |
K |
E |
R |
V |
N |
- |
M |
Os000774_Os01t0 |
T |
K |
F |
V |
L |
T |
M |
P |
T |
F |
Y |
P |
A |
L |
I |
P |
V |
P |
L |
T |
L |
W |
P |
P |
- |
- |
- |
- |
- |
- |
- |
N |
V |
A |
N |
V |
G |
E |
S |
G |
T |
N |
H |
E |
I |
L |
K |
P |
T |
P |
V |
N |
G |
K |
E |
V |
I |
N |
K |
A |
|
AT3G16350.1 |
D |
E |
L |
V |
G |
M |
S |
Q |
L |
S |
I |
G |
M |
A |
T |
R |
H |
E |
T |
E |
T |
S |
P |
S |
P |
L |
S |
L |
R |
L |
E |
- |
P |
- |
- |
S |
R |
P |
S |
A |
F |
H |
S |
N |
G |
S |
V |
N |
G |
A |
D |
L |
S |
K |
- |
G |
N |
S |
A |
I |
Os000774_Os01t0 |
D |
E |
V |
V |
G |
M |
S |
K |
L |
T |
I |
G |
D |
G |
S |
S |
N |
S |
I |
E |
- |
- |
P |
S |
A |
L |
S |
L |
Q |
L |
T |
G |
P |
T |
N |
T |
R |
Q |
S |
A |
F |
H |
V |
N |
P |
P |
M |
A |
G |
P |
D |
L |
N |
K |
R |
N |
N |
S |
P |
I |
|
AT3G16350.1 |
Q |
A |
I |
Os000774_Os01t0 |
H |
A |
V |
|
|