fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G16350.1 SSSAVKLFGVRLTDG at 47/387 in AT3G16350.1
KSYLPSLELSLNNTTE at 235/387 in AT3G16350.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os000774 GGGGVRLFGVRLTSP in 31/366 AT3G16350.1 1st_1st 0.361774744 Ib
SIEPSALSLQLTGPTN in 328/366
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G16350.1     MTRRCSHCSNNGHNSRTCPTRGGGTCGGSGGGGGGGGGGGSGSSSAVKLFGVRLTDGS--
Os000774_Os01t0 MTRRCSHCSNNGHNARTCPAR-----------GGGGGGGG------VRLFGVRLTSPPEV
                **************:****:*           ********      *:*******. .  

AT3G16350.1     IIKKSASMGNLSALAVAAAAATHHRLSPSSPLATSNLNDSPLSDHARYSNLHHNEGYLSD
Os000774_Os01t0 AMKKSASMS-----CIASSLGSGGGSGGSSPAGTGRGGGGGGEGAA---------GYASD
                 :******.     .:*:: .:    . *** .*.. ...  .. *         ** **

AT3G16350.1     DPAHGSGSSHRRGERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASH
Os000774_Os01t0 DPTHASCSTNGRGERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASH
                **:*.* *:: *****:*.********:**:****************:*.**********

AT3G16350.1     AQKYFIRHTSSSRRKRRSSLFDMVTDEMVTDSSP----------TQEEQTLNGSSP----
Os000774_Os01t0 AQKYFIRQTNSSRRKRRSSLFDMVP-EMPMDESPVVVEQLMLHSTQDEATSSNQLPISHL
                *******:*.**************. **  *.**          **:* * ... *    

AT3G16350.1     --SKEPEKKSYLPSLELSLNNTTEAEEVVATAPRQEKSQEAIEPS--------NGVSP--
Os000774_Os01t0 VKQKEPEFARHLSDLQL----------------RKHEESEFTEPSLAALDLEMNHAAPFK
                  .****   :*..*:*                *:.:..*  ***        * .:*  

AT3G16350.1     ---MLVPGGFFPPCFPVTYTIWLPASLHGTEHALNAETSSQQHQVLKPKPGFAKERVN-M
Os000774_Os01t0 TKFVLTMPTFYPALIPVPLTLWPP-------NVANVGESGTNHEILKPTPVNGKEVINKA
                   :*.   *:*. :**. *:* *       :. *.  *. :*::***.*  .** :*  

AT3G16350.1     DELVGMSQLSIGMATRHETETSPSPLSLRLE-P--SRPSAFHSNGSVNGADLSK-GNSAI
Os000774_Os01t0 DEVVGMSKLTIGDGSSNSIE--PSALSLQLTGPTNTRQSAFHVNPPMAGPDLNKRNNSPI
                **:****:*:** .: :. *  **.***:*  *  :* **** * .: *.**.* .**.*

AT3G16350.1     QAI
Os000774_Os01t0 HAV
                :*:
BoxShade v3.31 C (beta, 970507) Output
AT3G16350.1     M T R R C S H C S N N G H N S R T C P T R G G G T C G G S G G G G G G G G G G G S G S S S A V K L F G V R L T D G S - -
Os000774_Os01t0    M T R R C S H C S N N G H N A R T C P A R - - - - - - - - - - - G G G G G G G G - - - - - - V R L F G V R L T S P P E V
 
AT3G16350.1     I I K K S A S M G N L S A L A V A A A A A T H H R L S P S S P L A T S N L N D S P L S D H A R Y S N L H H N E G Y L S D
Os000774_Os01t0    A M K K S A S M S - - - - - C I A S S L G S G G G S G G S S P A G T G R G G G G G G E G A A - - - - - - - - - G Y A S D
 
AT3G16350.1     D P A H G S G S S H R R G E R K R G V P W T E E E H R L F L V G L Q K L G K G D W R G I S R N Y V T S R T P T Q V A S H
Os000774_Os01t0    D P T H A S C S T N G R G E R K K G T P W T E E E H R M F L M G L Q K L G K G D W R G I S R N F V V S R T P T Q V A S H
 
AT3G16350.1     A Q K Y F I R H T S S S R R K R R S S L F D M V T D E M V T D S S P - - - - - - - - - - T Q E E Q T L N G S S P - - - -
Os000774_Os01t0    A Q K Y F I R Q T N S S R R K R R S S L F D M V P - E M P M D E S P V V V E Q L M L H S T Q D E A T S S N Q L P I S H L
 
AT3G16350.1     - - S K E P E K K S Y L P S L E L S L N N T T E A E E V V A T A P R Q E K S Q E A I E P S - - - - - - - - N G V S P - -
Os000774_Os01t0    V K Q K E P E F A R H L S D L Q L - - - - - - - - - - - - - - - - R K H E E S E F T E P S L A A L D L E M N H A A P F K
 
AT3G16350.1     - - - M L V P G G F F P P C F P V T Y T I W L P A S L H G T E H A L N A E T S S Q Q H Q V L K P K P G F A K E R V N - M
Os000774_Os01t0    T K F V L T M P T F Y P A L I P V P L T L W P P - - - - - - - N V A N V G E S G T N H E I L K P T P V N G K E V I N K A
 
AT3G16350.1     D E L V G M S Q L S I G M A T R H E T E T S P S P L S L R L E - P - - S R P S A F H S N G S V N G A D L S K - G N S A I
Os000774_Os01t0    D E V V G M S K L T I G D G S S N S I E - - P S A L S L Q L T G P T N T R Q S A F H V N P P M A G P D L N K R N N S P I
 
AT3G16350.1     Q A I
Os000774_Os01t0    H A V
 
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