fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G16350.1 SSSAVKLFGVRLTDG at 47/387 in AT3G16350.1
KSYLPSLELSLNNTTE at 235/387 in AT3G16350.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024608 SGGGVRLFGVRLTTA in 73/407 AT3G16350.1 1st_1st 0.366894197 Ib
SMEPTALSLQLIGSTD in 369/407
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G16350.1     ----------------------------------------------MTRRCSHCSNNGHN
Sb024608_Sorbi1 GKKREGEGGEQPRAHGVAFGTLAARRTYEPVASARVARTRASPPERMTRRCSHCSNNGHN
                                                              **************

AT3G16350.1     SRTCPTRGGGTCGGSGGGGGGGGGGGSGSSSAVKLFGVRLTDG---SIIKKSASMGNLSA
Sb024608_Sorbi1 SRTCPAR-------SGGG--------------VRLFGVRLTTAPAPAAMKKSASM---SC
                *****:*       ****              *:******* .   : :******   *.

AT3G16350.1     LAVAAAAATHHRLSPSSPLATSNLNDSPLSDHARYSNLHHNEGYLSDDPAHGSGSSHRRG
Sb024608_Sorbi1 IASSLGGGS----GGSSPPAGGVGGGRGGGDGG--------AGYVSDDPGHASCSTNGRV
                :* : ...:    . *** * .  ..   .* .         **:****.*.* *:: * 

AT3G16350.1     ERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASHAQKYFIRHTSSSR
Sb024608_Sorbi1 ERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSR
                ***:*.********:**:****************:*.*****************:*.***

AT3G16350.1     RKRRSSLFDMVTDEMVTDSS----------PTQEEQTLNGSSPS------KEPEKKSYLP
Sb024608_Sorbi1 RKRRSSLFDMVA-EMPVDESLAAAEQITIQNTQDEAASSNQLPTLHLGHQKEAEFAKQMP
                ***********: ** .*.*           **:* : ... *:      **.*  . :*

AT3G16350.1     SLELSLNNTTEAEEVVATAPRQEKSQEAIEPSNGVSPMLVPGGFFPPCFPVTYTIWLPAS
Sb024608_Sorbi1 TFQLRQHEESEYAEPSLTLPDLEMNSSV--PFNTIAVPTMP-AFYPALVPVPLTLWPPSV
                :::*  :: :*  *   * *  * ....  * * ::   :* .*:*. .**. *:* *: 

AT3G16350.1     LHGTEHALNAETSSQQHQVLKPKPGFAKERVNMDELVGMSQLSIGMATRHETETSPSPLS
Sb024608_Sorbi1 AH-------VEDAGTTHEILKPTPLNGKEVIKADDVVGMSKLSIGEASSGSME--PTALS
                 *       .* :.  *::***.*  .** :: *::****:**** *:  . *  *:.**

AT3G16350.1     LRL---EPSRPSAFHSNGSVNGADLSKGNSA-IQAI
Sb024608_Sorbi1 LQLIGSTDTRQSAFHVSPPMNRPELSKRNSSPIHAV
                *:*     :* **** . .:* .:*** **: *:*:
BoxShade v3.31 C (beta, 970507) Output
AT3G16350.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M T R R C S H C S N N G H N
Sb024608_Sorbi1    G K K R E G E G G E Q P R A H G V A F G T L A A R R T Y E P V A S A R V A R T R A S P P E R M T R R C S H C S N N G H N
 
AT3G16350.1     S R T C P T R G G G T C G G S G G G G G G G G G G G S G S S S A V K L F G V R L T D G - - - S I I K K S A S M G N L S A
Sb024608_Sorbi1    S R T C P A R - - - - - - - S G G G - - - - - - - - - - - - - - V R L F G V R L T T A P A P A A M K K S A S M - - - S C
 
AT3G16350.1     L A V A A A A A T H H R L S P S S P L A T S N L N D S P L S D H A R Y S N L H H N E G Y L S D D P A H G S G S S H R R G
Sb024608_Sorbi1    I A S S L G G G S - - - - G G S S P P A G G V G G G R G G G D G G - - - - - - - - A G Y V S D D P G H A S C S T N G R V
 
AT3G16350.1     E R K R G V P W T E E E H R L F L V G L Q K L G K G D W R G I S R N Y V T S R T P T Q V A S H A Q K Y F I R H T S S S R
Sb024608_Sorbi1    E R K K G T P W T E E E H R M F L M G L Q K L G K G D W R G I S R N F V V S R T P T Q V A S H A Q K Y F I R Q T N S S R
 
AT3G16350.1     R K R R S S L F D M V T D E M V T D S S - - - - - - - - - - P T Q E E Q T L N G S S P S - - - - - - K E P E K K S Y L P
Sb024608_Sorbi1    R K R R S S L F D M V A - E M P V D E S L A A A E Q I T I Q N T Q D E A A S S N Q L P T L H L G H Q K E A E F A K Q M P
 
AT3G16350.1     S L E L S L N N T T E A E E V V A T A P R Q E K S Q E A I E P S N G V S P M L V P G G F F P P C F P V T Y T I W L P A S
Sb024608_Sorbi1    T F Q L R Q H E E S E Y A E P S L T L P D L E M N S S V - - P F N T I A V P T M P - A F Y P A L V P V P L T L W P P S V
 
AT3G16350.1     L H G T E H A L N A E T S S Q Q H Q V L K P K P G F A K E R V N M D E L V G M S Q L S I G M A T R H E T E T S P S P L S
Sb024608_Sorbi1    A H - - - - - - - V E D A G T T H E I L K P T P L N G K E V I K A D D V V G M S K L S I G E A S S G S M E - - P T A L S
 
AT3G16350.1     L R L - - - E P S R P S A F H S N G S V N G A D L S K G N S A - I Q A I
Sb024608_Sorbi1    L Q L I G S T D T R Q S A F H V S P P M N R P E L S K R N S S P I H A V
 
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