fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G16350.1 SSSAVKLFGVRLTDG at 47/387 in AT3G16350.1
KSYLPSLELSLNNTTE at 235/387 in AT3G16350.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm038242 GGGGVKLFGVRLTDG in 27/356 AT3G16350.1 not_1st 0.474402730 II
GKSQPSLNLSLKSEFE in 208/356
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G16350.1     MTRRCSHCSNNGHNSRTCPTRGGGTCGGSGGGGGGGGGGGSGSSSAVKLFGVRLTDGSII
gm038242_Glyma1 MTRRCSHCSNNGHNSRTCPSRGGG---------------------GVKLFGVRLTDGSII
                *******************:****                     .**************

AT3G16350.1     KKSASMGNLSALAVAAAAATHHRL-----------SPSSPLATSNLNDSPLSDHARYSNL
gm038242_Glyma1 KKSASMGNLN----LSSAAAHHQFHSSPSSSNLAAAPSSPNPSSPCSDPP----------
                *********.     ::**:**::           :**** .:*  .*.*          

AT3G16350.1     HHNEGYLSDDPAHGSGSSHRRGERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTS
gm038242_Glyma1 ---QGYLSDDPAHVSTFANRRGDRKKGVPWTEEEHRLFLIGLQKLGKGDWRGIARNFVVS
                   :********* *  ::***:**:*************:*************:**:*.*

AT3G16350.1     RTPTQVASHAQKYFIRHTSSSRRKRRSSLFDMVTDEMVTDSSPTQEEQTLNGSSPSKEPE
gm038242_Glyma1 RTPTQVASHAQKYFIRQSHATRRKRRSSLFDMVPD-MSSDQPSVPEEQVLLPPSQNSQPC
                ****************:: ::************.* * :*.... ***.*  .* ..:* 

AT3G16350.1     KKSYLPSLELSLNNTTEAEEVVATAPRQEKSQEAIEP---SNGVSPMLVPGGFFPPCFPV
gm038242_Glyma1 NGKSQPSLNLSLKSEFEPMETTS----QENAQQTNETMMGSIGLTPM-APHGFFPAYLPV
                : .  ***:***:.  *. *..:    **::*:: *.   * *::** .* ****. :**

AT3G16350.1     TYTIWLPASLHGTEHALNAETSSQQHQVLKPKPGFAKERVNMDELVGMSQLSIGMATRHE
gm038242_Glyma1 PFPMWPSTVAPPFEEVKGGETS--HHQIHKPIPVIPKEPVNVDELVGMSHLSIGEAKVRD
                .:.:* .:     *.. ..***  :**: ** * :.** **:*******:**** *. ::

AT3G16350.1     TETSPSPLSLRL--EPSRPSAFHSNGSVNGADLSKG-NSAIQAI
gm038242_Glyma1 RE--PSPLSLKLLGEPSRQSAFHANAPVGTSDLNNGKDNAIQAV
                 *  ******:*  **** ****:*..*. :**.:* :.****:
BoxShade v3.31 C (beta, 970507) Output
AT3G16350.1     M T R R C S H C S N N G H N S R T C P T R G G G T C G G S G G G G G G G G G G G S G S S S A V K L F G V R L T D G S I I
gm038242_Glyma1    M T R R C S H C S N N G H N S R T C P S R G G G - - - - - - - - - - - - - - - - - - - - - G V K L F G V R L T D G S I I
 
AT3G16350.1     K K S A S M G N L S A L A V A A A A A T H H R L - - - - - - - - - - - S P S S P L A T S N L N D S P L S D H A R Y S N L
gm038242_Glyma1    K K S A S M G N L N - - - - L S S A A A H H Q F H S S P S S S N L A A A P S S P N P S S P C S D P P - - - - - - - - - -
 
AT3G16350.1     H H N E G Y L S D D P A H G S G S S H R R G E R K R G V P W T E E E H R L F L V G L Q K L G K G D W R G I S R N Y V T S
gm038242_Glyma1    - - - Q G Y L S D D P A H V S T F A N R R G D R K K G V P W T E E E H R L F L I G L Q K L G K G D W R G I A R N F V V S
 
AT3G16350.1     R T P T Q V A S H A Q K Y F I R H T S S S R R K R R S S L F D M V T D E M V T D S S P T Q E E Q T L N G S S P S K E P E
gm038242_Glyma1    R T P T Q V A S H A Q K Y F I R Q S H A T R R K R R S S L F D M V P D - M S S D Q P S V P E E Q V L L P P S Q N S Q P C
 
AT3G16350.1     K K S Y L P S L E L S L N N T T E A E E V V A T A P R Q E K S Q E A I E P - - - S N G V S P M L V P G G F F P P C F P V
gm038242_Glyma1    N G K S Q P S L N L S L K S E F E P M E T T S - - - - Q E N A Q Q T N E T M M G S I G L T P M - A P H G F F P A Y L P V
 
AT3G16350.1     T Y T I W L P A S L H G T E H A L N A E T S S Q Q H Q V L K P K P G F A K E R V N M D E L V G M S Q L S I G M A T R H E
gm038242_Glyma1    P F P M W P S T V A P P F E E V K G G E T S - - H H Q I H K P I P V I P K E P V N V D E L V G M S H L S I G E A K V R D
 
AT3G16350.1     T E T S P S P L S L R L - - E P S R P S A F H S N G S V N G A D L S K G - N S A I Q A I
gm038242_Glyma1    R E - - P S P L S L K L L G E P S R Q S A F H A N A P V G T S D L N N G K D N A I Q A V
 
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