fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G16500.1 TDQEKKLELRLGPPGG at 36/269 in AT3G16500.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm040891 SSEERKLELRLGPPGE in 38/320 AT3G16500.1 not_1st 0.465454545 II
Gm038235 SSEERKLELRLGPPGE in 38/346 AT3G16500.1 not_1st 0.416363636 II
Gm038234 SSEERKLELRLGPPGE in 38/346 AT3G16500.1 not_1st 0.416363636 II
Pt030849 SSEEKKLELRLGPPGE in 39/336 AT3G16500.1 not_1st 0.412727272 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G16500.1     MEGCPRNREIGPKLLDLIPQGRKWY--QEDKNNTDQEKKLELRLGPPGGDEEDHSA---I
pt030849_POPTR_ MEGCSKNVEACPRLLDLIPKEREWLGKREDERSSSEEKKLELRLGPPG---EDWSL----
gm038234_Glyma1 MNERSRD-EASPQLLDLISNEREWQMNKRNEGKSSEERKLELRLGPPG---EDWSLGGKM
gm038235_Glyma1 MNERSRD-EASPQLLDLISNEREWQMNKRNEGKSSEERKLELRLGPPG---EDWSLGGKM
gm040891_Glyma1 MDERSRN-EASPQLLDLISNEREWQMNKRNEGKSSEERKLELRLGPPG---EDWSLGGKM
                *:  .:: *  *:*****.: *:*   :.:: .:.:*:**********   ** *     

AT3G16500.1     KK-KNTEIRNIKKETEDKSFHCFNG-NH--------------------------------
pt030849_POPTR_ KNTSNRE----RHESQLNSFGYFTNGNQQTHKFPSSAENSHVWFNQQQQGQ------VAP
gm038234_Glyma1 KN-NNTE----REDQSLLSLGCFSP-NINSNAFQSKA--SHPWPNYHHHGQGNNKKASSS
gm038235_Glyma1 KN-NNTE----REDQSLLSLGCFSP-NINSNAFQSKA--SHPWPNYHHHGQGNNKKASSS
gm040891_Glyma1 K---NTE----RE-ESLLSLGCFSP-N---NGFQSKA--S-PWPNYHHHHQGNNNKASSS
                *   * *    :.  .  *:  *.  *                                 

AT3G16500.1     -------------------------------------------------FS-PSNKTTSV
pt030849_POPTR_ PFLKFPSSSTPPAATASQQSLPIMAKESSQPCCTKAVVEL-QQCAEKKAFSPPAPANTAV
gm038234_Glyma1 SFLQFPSSTQP----------VMMGKDAS---CPKVVVELQQNGGDGKVFS-PSSANTAV
gm038235_Glyma1 SFLQFPSSTQP----------VMMGKDAS---CPKVVVELQQNGGDGKVFS-PSSANTAV
gm040891_Glyma1 SFLQ----------------------------CPKVVVEL-QNGGDGKVFS-PSSANTAV
                                                                 ** *:  .*:*

AT3G16500.1     --PHISQKRTAPGPVVGWPPVRSFRKNLAST--SSSK--LGNESSHGGQINKSDDGEKQV
pt030849_POPTR_ --PNSSQKRTAPGPVVGWPPIRSFRKNLASSSGSYSK--PTVESQ-----------NKPV
gm038234_Glyma1 SQPNTSQKRTAPAPVVGWPPIRSFRKNLSSSS-SASKPPPPPESQAEQQHNKV-AGKKPV
gm038235_Glyma1 SQPNTSQKRTAPAPVVGWPPIRSFRKNLSSSS-SASKPPPPPESQAEQQHNKV-AGKKPV
gm040891_Glyma1 SQPNTSQKRTAPAPVVGWPPIRSFRKNLASSS-SASK--PPPESQAE-QHNKV-AGKKPV
                  *: *******.*******:*******:*:  * **     **.           :* *

AT3G16500.1     ETK--KEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRD-----ISD
pt030849_POPTR_ ETC--KKGLFVKINMEGVPIGRKVDLKAYDTYEKLSIAVDELFRGLLAAQRDSSSNGIMD
gm038234_Glyma1 DNYANNKGLFVKINMDGVPIGRKVDLNAYDSYENLSSAVDELFRGLLAAQRDSSAGGVHN
gm038235_Glyma1 DNYANNKGLFVKINMDGVPIGRKVDLNAYDSYENLSSAVDELFRGLLAAQRDSSAGGVHN
gm040891_Glyma1 DNYANNKGLFVKINMDGVPIGRKVDLNAYDSYENLSSAVDELFRGLLAAQRDSSAGGVHN
                :.   ::*:******:**********:**::**:** .**:***********     : :

AT3G16500.1     GQGEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEISSALT
pt030849_POPTR_ KQEEAKAITGVLDGSGEYTLVYEDNEGDMMLVGDVPWHMFVSTVKRLRVLKSSEV-SALS
gm038234_Glyma1 KQEEEKAITGLLDGSGEFTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEL-SAFT
gm038235_Glyma1 KQEEEKAITGLLDGSGEFTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEL-SAFT
gm040891_Glyma1 KQEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEL-SAFT
                 * * *.* *:***.**:**.******* ********:****:******:****: **::

AT3G16500.1     FGCSKQEKMMH-----
pt030849_POPTR_ LGSIKQEKVAVN----
gm038234_Glyma1 LGS-KQDKIPLDSAMK
gm038235_Glyma1 LGS-KQDKIPLDSAMK
gm040891_Glyma1 LGS-KQDKIPLDSAMK
                :*. **:*:
BoxShade v3.31 C (beta, 970507) Output
AT3G16500.1     M E G C P R N R E I G P K L L D L I P Q G R K W Y - - Q E D K N N T D Q E K K L E L R L G P P G G D E E D H S A - - - I
pt030849_POPTR_    M E G C S K N V E A C P R L L D L I P K E R E W L G K R E D E R S S S E E K K L E L R L G P P G - - - E D W S L - - - -
gm038234_Glyma1    M N E R S R D - E A S P Q L L D L I S N E R E W Q M N K R N E G K S S E E R K L E L R L G P P G - - - E D W S L G G K M
gm038235_Glyma1    M N E R S R D - E A S P Q L L D L I S N E R E W Q M N K R N E G K S S E E R K L E L R L G P P G - - - E D W S L G G K M
gm040891_Glyma1    M D E R S R N - E A S P Q L L D L I S N E R E W Q M N K R N E G K S S E E R K L E L R L G P P G - - - E D W S L G G K M
 
AT3G16500.1     K K - K N T E I R N I K K E T E D K S F H C F N G - N H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt030849_POPTR_    K N T S N R E - - - - R H E S Q L N S F G Y F T N G N Q Q T H K F P S S A E N S H V W F N Q Q Q Q G Q - - - - - - V A P
gm038234_Glyma1    K N - N N T E - - - - R E D Q S L L S L G C F S P - N I N S N A F Q S K A - - S H P W P N Y H H H G Q G N N K K A S S S
gm038235_Glyma1    K N - N N T E - - - - R E D Q S L L S L G C F S P - N I N S N A F Q S K A - - S H P W P N Y H H H G Q G N N K K A S S S
gm040891_Glyma1    K - - - N T E - - - - R E - E S L L S L G C F S P - N - - - N G F Q S K A - - S - P W P N Y H H H H Q G N N N K A S S S
 
AT3G16500.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - F S - P S N K T T S V
pt030849_POPTR_    P F L K F P S S S T P P A A T A S Q Q S L P I M A K E S S Q P C C T K A V V E L - Q Q C A E K K A F S P P A P A N T A V
gm038234_Glyma1    S F L Q F P S S T Q P - - - - - - - - - - V M M G K D A S - - - C P K V V V E L Q Q N G G D G K V F S - P S S A N T A V
gm038235_Glyma1    S F L Q F P S S T Q P - - - - - - - - - - V M M G K D A S - - - C P K V V V E L Q Q N G G D G K V F S - P S S A N T A V
gm040891_Glyma1    S F L Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - C P K V V V E L - Q N G G D G K V F S - P S S A N T A V
 
AT3G16500.1     - - P H I S Q K R T A P G P V V G W P P V R S F R K N L A S T - - S S S K - - L G N E S S H G G Q I N K S D D G E K Q V
pt030849_POPTR_    - - P N S S Q K R T A P G P V V G W P P I R S F R K N L A S S S G S Y S K - - P T V E S Q - - - - - - - - - - - N K P V
gm038234_Glyma1    S Q P N T S Q K R T A P A P V V G W P P I R S F R K N L S S S S - S A S K P P P P P E S Q A E Q Q H N K V - A G K K P V
gm038235_Glyma1    S Q P N T S Q K R T A P A P V V G W P P I R S F R K N L S S S S - S A S K P P P P P E S Q A E Q Q H N K V - A G K K P V
gm040891_Glyma1    S Q P N T S Q K R T A P A P V V G W P P I R S F R K N L A S S S - S A S K - - P P P E S Q A E - Q H N K V - A G K K P V
 
AT3G16500.1     E T K - - K E G M F V K I N M D G V P I G R K V D L N A Y N S Y E Q L S F V V D K L F R G L L A A Q R D - - - - - I S D
pt030849_POPTR_    E T C - - K K G L F V K I N M E G V P I G R K V D L K A Y D T Y E K L S I A V D E L F R G L L A A Q R D S S S N G I M D
gm038234_Glyma1    D N Y A N N K G L F V K I N M D G V P I G R K V D L N A Y D S Y E N L S S A V D E L F R G L L A A Q R D S S A G G V H N
gm038235_Glyma1    D N Y A N N K G L F V K I N M D G V P I G R K V D L N A Y D S Y E N L S S A V D E L F R G L L A A Q R D S S A G G V H N
gm040891_Glyma1    D N Y A N N K G L F V K I N M D G V P I G R K V D L N A Y D S Y E N L S S A V D E L F R G L L A A Q R D S S A G G V H N
 
AT3G16500.1     G Q G E E K P I I G L L D G K G E F T L T Y E D N E G D K M L V G D V P W Q M F V S S V K R L R V I K S S E I S S A L T
pt030849_POPTR_    K Q E E A K A I T G V L D G S G E Y T L V Y E D N E G D M M L V G D V P W H M F V S T V K R L R V L K S S E V - S A L S
gm038234_Glyma1    K Q E E E K A I T G L L D G S G E F T L V Y E D N E G D R M L V G D V P W H M F V S T V K R L R V L K S S E L - S A F T
gm038235_Glyma1    K Q E E E K A I T G L L D G S G E F T L V Y E D N E G D R M L V G D V P W H M F V S T V K R L R V L K S S E L - S A F T
gm040891_Glyma1    K Q E E E K A I T G L L D G S G E Y T L V Y E D N E G D R M L V G D V P W H M F V S T V K R L R V L K S S E L - S A F T
 
AT3G16500.1     F G C S K Q E K M M H - - - - -
pt030849_POPTR_    L G S I K Q E K V A V N - - - -
gm038234_Glyma1    L G S - K Q D K I P L D S A M K
gm038235_Glyma1    L G S - K Q D K I P L D S A M K
gm040891_Glyma1    L G S - K Q D K I P L D S A M K
 
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