fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G16500.1 TDQEKKLELRLGPPGG at 36/269 in AT3G16500.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os007108 EEEEKTLELSLGLPGG in 40/300 AT3G16500.1 1st_1st 0.349090909 Ib
Sb009950 GDDEETLQLSLGLPGG in 32/292 AT3G16500.1 1st_1st 0.336363636 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G16500.1     -------MEGCPRNREIGPKLLDLIPQGRKWYQEDKN-------NTDQEKKLELRLGPPG
Sb009950_Sorbi1 MGDAAETTSKTLH----------------NWMAEPRP---RPSGQGDDEETLQLSLGLPG
Os007108_Os02t0 MGEASESMKKISRGR-----------LGGSWMGEPSDHHRHGDEQEEEEKTLELSLGLPG
                        .   :                .*  *          : ::*:.*:* ** **

AT3G16500.1     GDEEDHS-------------AIKKK-NTEIRNIKKETE------DKSFHC---FNGNHFS
Sb009950_Sorbi1 GGGGNGAGAGLPPAAAWRMLPARDK---EMHSAAAAV-------DTSSMLSLGYSAPAFS
Os007108_Os02t0 GG--------------WRA-ACRDKGTTTKHSIAAAAAADDDDGDKSSMLSLGYSTLV--
                *.                  . :.*     :.    .       *.*      :.     

AT3G16500.1     PSNKTTSV-------------PHI---------------SQKRTAPGPVVGWPPVRSFRK
Sb009950_Sorbi1 PARSPGKA---KGS-------PAAATENARLASTNNASQARQRSPNTPVIGWPPVRAFRR
Os007108_Os02t0 -SHSQGKANKNKGSPEEEEAHPPPATGNNALASNNNGC-FQTRSPSTPVVGWPPVRTFRR
                 :..  ..             *                  : *:.  **:******:**:

AT3G16500.1     NLASTSSSKLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSY
Sb009950_Sorbi1 NLATSSKASL--EHHNGKKAARPE------ETTKRAPFVKINMDGIPIGRKIDLNALGSY
Os007108_Os02t0 NLATSSKASL--ELQNGKKAAKAE------E-IKRAPFIKINMDGVPIGRKIDLNAFDSY
                ***::*.:.*  *  :* :  :.:      *  *.. *:******:*****:**** .**

AT3G16500.1     EQLSFVVDKLFRGLLAAQRD-----ISDGQGEEKPIIGLLDGKGEFTLTYEDNEGDKMLV
Sb009950_Sorbi1 DELSLSVDKLFRGLLAAQQDPLDASTKECSQEEVAISGLLDGTGEYTLVYEDYEGDRVLV
Os007108_Os02t0 EKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISGLLDGTGEYTLVYEDYEGDKVLV
                ::**: ************:*      .: . *: .* *****.**:**.*** ***::**

AT3G16500.1     GDVPWQMFVSSVKRLRVIKSSEISSALTFGCSKQEKMMH--
Sb009950_Sorbi1 GDVPWGMFVSSVKRLRVLKTSDLSSSLT--ASGRKRTVTEC
Os007108_Os02t0 GDVPWGMFVSSVKRLRVLKTSDLSSSLI--TSGRKRTAAEC
                ***** ***********:*:*::**:*    * :::
BoxShade v3.31 C (beta, 970507) Output
AT3G16500.1     - - - - - - - M E G C P R N R E I G P K L L D L I P Q G R K W Y Q E D K N - - - - - - - N T D Q E K K L E L R L G P P G
Sb009950_Sorbi1    M G D A A E T T S K T L H - - - - - - - - - - - - - - - - N W M A E P R P - - - R P S G Q G D D E E T L Q L S L G L P G
Os007108_Os02t0    M G E A S E S M K K I S R G R - - - - - - - - - - - L G G S W M G E P S D H H R H G D E Q E E E E K T L E L S L G L P G
 
AT3G16500.1     G D E E D H S - - - - - - - - - - - - - A I K K K - N T E I R N I K K E T E - - - - - - D K S F H C - - - F N G N H F S
Sb009950_Sorbi1    G G G G N G A G A G L P P A A A W R M L P A R D K - - - E M H S A A A A V - - - - - - - D T S S M L S L G Y S A P A F S
Os007108_Os02t0    G G - - - - - - - - - - - - - - W R A - A C R D K G T T T K H S I A A A A A A D D D D G D K S S M L S L G Y S T L V - -
 
AT3G16500.1     P S N K T T S V - - - - - - - - - - - - - P H I - - - - - - - - - - - - - - - S Q K R T A P G P V V G W P P V R S F R K
Sb009950_Sorbi1    P A R S P G K A - - - K G S - - - - - - - P A A A T E N A R L A S T N N A S Q A R Q R S P N T P V I G W P P V R A F R R
Os007108_Os02t0    - S H S Q G K A N K N K G S P E E E E A H P P P A T G N N A L A S N N N G C - F Q T R S P S T P V V G W P P V R T F R R
 
AT3G16500.1     N L A S T S S S K L G N E S S H G G Q I N K S D D G E K Q V E T K K E G M F V K I N M D G V P I G R K V D L N A Y N S Y
Sb009950_Sorbi1    N L A T S S K A S L - - E H H N G K K A A R P E - - - - - - E T T K R A P F V K I N M D G I P I G R K I D L N A L G S Y
Os007108_Os02t0    N L A T S S K A S L - - E L Q N G K K A A K A E - - - - - - E - I K R A P F I K I N M D G V P I G R K I D L N A F D S Y
 
AT3G16500.1     E Q L S F V V D K L F R G L L A A Q R D - - - - - I S D G Q G E E K P I I G L L D G K G E F T L T Y E D N E G D K M L V
Sb009950_Sorbi1    D E L S L S V D K L F R G L L A A Q Q D P L D A S T K E C S Q E E V A I S G L L D G T G E Y T L V Y E D Y E G D R V L V
Os007108_Os02t0    E K L S L A V D K L F R G L L A A Q R D P L T A G A K D C Q Q E D V A I S G L L D G T G E Y T L V Y E D Y E G D K V L V
 
AT3G16500.1     G D V P W Q M F V S S V K R L R V I K S S E I S S A L T F G C S K Q E K M M H - -
Sb009950_Sorbi1    G D V P W G M F V S S V K R L R V L K T S D L S S S L T - - A S G R K R T V T E C
Os007108_Os02t0    G D V P W G M F V S S V K R L R V L K T S D L S S S L I - - T S G R K R T A A E C
 
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