fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G16500.1 TDQEKKLELRLGPPGG at 36/269 in AT3G16500.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt030850 SSEEKKLELRLGPPGE in 39/336 AT3G16500.1 1st_1st 0.412727272 Ia
Pt030849 SSEEKKLELRLGPPGE in 39/336 AT3G16500.1 not_1st 0.412727272 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G16500.1     MEGCPRNREIGPKLLDLIPQGRKWY--QEDKNNTDQEKKLELRLGPPGGDEEDHSAIKKK
pt030849_POPTR_ MEGCSKNVEACPRLLDLIPKEREWLGKREDERSSSEEKKLELRLGPPG---EDWSL---K
pt030850_POPTR_ MEGCSKNVEACPRLLDLIPKEREWLGKREDERSSSEEKKLELRLGPPG---EDWSL---K
                ****.:* *  *:******: *:*   :**:..:.:************   ** *    *

AT3G16500.1     NTEIRNIKKETEDKSFHCF-NGNH------------------------------------
pt030849_POPTR_ NTSNRE-RHESQLNSFGYFTNGNQQTHKFPSSAENSHVWFNQQQQGQVAPPFLKFPSSST
pt030850_POPTR_ NTSNRE-RHESQLNSFGYFTNGNQQTHKFPSSAENSHVWFNQQQQGQVAPPFLKFPSSST
                **. *: ::*:: :**  * ***:                                    

AT3G16500.1     --------------------------------------FS-PSNKTTSVPHISQKRTAPG
pt030849_POPTR_ PPAATASQQSLPIMAKESSQPCCTKAVVELQQCAEKKAFSPPAPANTAVPNSSQKRTAPG
pt030850_POPTR_ PPAATASQQSLPIMAKESSQPCCTKAVVELQQCAEKKAFSPPAPANTAVPNSSQKRTAPG
                                                      ** *:  .*:**: ********

AT3G16500.1     PVVGWPPVRSFRKNLASTSS--SKLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDG
pt030849_POPTR_ PVVGWPPIRSFRKNLASSSGSYSKPTVESQN-----------KPVETCKKGLFVKINMEG
pt030850_POPTR_ PVVGWPPIRSFRKNLASSSGSYSKPTVESQN-----------KPVETCKKGLFVKINMEG
                *******:*********:*.  **   **.:           * *** *:*:******:*

AT3G16500.1     VPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRD-----ISDGQGEEKPIIGLLDGKGE
pt030849_POPTR_ VPIGRKVDLKAYDTYEKLSIAVDELFRGLLAAQRDSSSNGIMDKQEEAKAITGVLDGSGE
pt030850_POPTR_ VPIGRKVDLKAYDTYEKLSIAVDELFRGLLAAQRDSSSNGIMDKQEEAKAITGVLDGSGE
                *********:**::**:**:.**:***********     * * * * *.* *:***.**

AT3G16500.1     FTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEISSALTFGCSKQEKMMH-
pt030849_POPTR_ YTLVYEDNEGDMMLVGDVPWHMFVSTVKRLRVLKSSEV-SALSLGSIKQEKVAVN
pt030850_POPTR_ YTLVYEDNEGDMMLVGDVPWHMFVSTVKRLRVLKSSEV-SALSLGSIKQEKVAVN
                :**.******* ********:****:******:****: ***::*. ****:
BoxShade v3.31 C (beta, 970507) Output
AT3G16500.1     M E G C P R N R E I G P K L L D L I P Q G R K W Y - - Q E D K N N T D Q E K K L E L R L G P P G G D E E D H S A I K K K
pt030849_POPTR_    M E G C S K N V E A C P R L L D L I P K E R E W L G K R E D E R S S S E E K K L E L R L G P P G - - - E D W S L - - - K
pt030850_POPTR_    M E G C S K N V E A C P R L L D L I P K E R E W L G K R E D E R S S S E E K K L E L R L G P P G - - - E D W S L - - - K
 
AT3G16500.1     N T E I R N I K K E T E D K S F H C F - N G N H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt030849_POPTR_    N T S N R E - R H E S Q L N S F G Y F T N G N Q Q T H K F P S S A E N S H V W F N Q Q Q Q G Q V A P P F L K F P S S S T
pt030850_POPTR_    N T S N R E - R H E S Q L N S F G Y F T N G N Q Q T H K F P S S A E N S H V W F N Q Q Q Q G Q V A P P F L K F P S S S T
 
AT3G16500.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - F S - P S N K T T S V P H I S Q K R T A P G
pt030849_POPTR_    P P A A T A S Q Q S L P I M A K E S S Q P C C T K A V V E L Q Q C A E K K A F S P P A P A N T A V P N S S Q K R T A P G
pt030850_POPTR_    P P A A T A S Q Q S L P I M A K E S S Q P C C T K A V V E L Q Q C A E K K A F S P P A P A N T A V P N S S Q K R T A P G
 
AT3G16500.1     P V V G W P P V R S F R K N L A S T S S - - S K L G N E S S H G G Q I N K S D D G E K Q V E T K K E G M F V K I N M D G
pt030849_POPTR_    P V V G W P P I R S F R K N L A S S S G S Y S K P T V E S Q N - - - - - - - - - - - K P V E T C K K G L F V K I N M E G
pt030850_POPTR_    P V V G W P P I R S F R K N L A S S S G S Y S K P T V E S Q N - - - - - - - - - - - K P V E T C K K G L F V K I N M E G
 
AT3G16500.1     V P I G R K V D L N A Y N S Y E Q L S F V V D K L F R G L L A A Q R D - - - - - I S D G Q G E E K P I I G L L D G K G E
pt030849_POPTR_    V P I G R K V D L K A Y D T Y E K L S I A V D E L F R G L L A A Q R D S S S N G I M D K Q E E A K A I T G V L D G S G E
pt030850_POPTR_    V P I G R K V D L K A Y D T Y E K L S I A V D E L F R G L L A A Q R D S S S N G I M D K Q E E A K A I T G V L D G S G E
 
AT3G16500.1     F T L T Y E D N E G D K M L V G D V P W Q M F V S S V K R L R V I K S S E I S S A L T F G C S K Q E K M M H -
pt030849_POPTR_    Y T L V Y E D N E G D M M L V G D V P W H M F V S T V K R L R V L K S S E V - S A L S L G S I K Q E K V A V N
pt030850_POPTR_    Y T L V Y E D N E G D M M L V G D V P W H M F V S T V K R L R V L K S S E V - S A L S L G S I K Q E K V A V N
 
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