fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G16500.1 TDQEKKLELRLGPPGG at 36/269 in AT3G16500.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb009950 GDDEETLQLSLGLPGG in 32/292 AT3G16500.1 1st_1st 0.336363636 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G16500.1     MEGCPRNREIGPKLLDLIPQGRKWYQEDK----NNTDQEKKLELRLGPPGG---------
Sb009950_Sorbi1 ---MGDAAETTSKTL------HNWMAEPRPRPSGQGDDEETLQLSLGLPGGGGGNGAGAG
                        *  .* *      ::*  * :    .: *:*:.*:* ** ***         

AT3G16500.1     -------------DEEDHSAIKKKNT-EIRNIKKETEDKSFHCFNGNHFSPSN-------
Sb009950_Sorbi1 LPPAAAWRMLPARDKEMHSAAAAVDTSSMLSLG----------YSAPAFSPARSPGKAKG
                             *:* ***    :* .: .:           :..  ***:.       

AT3G16500.1     ---------KTTSVPHISQ--KRTAPGPVVGWPPVRSFRKNLASTSSSKLGNESSHGGQI
Sb009950_Sorbi1 SPAAATENARLASTNNASQARQRSPNTPVIGWPPVRAFRRNLATSSKASL---EHHNGK-
                         : :*. : **  :*:.  **:******:**:***::*.:.*   . *.*: 

AT3G16500.1     NKSDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRD
Sb009950_Sorbi1 ----KAARPEETTKRAPFVKINMDGIPIGRKIDLNALGSYDELSLSVDKLFRGLLAAQQD
                    .. :  **.*.. ********:*****:**** .**::**: ************:*

AT3G16500.1     ISDGQG-----EEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKS
Sb009950_Sorbi1 PLDASTKECSQEEVAISGLLDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKT
                  *..      ** .* *****.**:**.*** ***::******* ***********:*:

AT3G16500.1     SEISSALTFGCSKQEKMMH--
Sb009950_Sorbi1 SDLSSSLT--ASGRKRTVTEC
                *::**:**  .* ::: :
BoxShade v3.31 C (beta, 970507) Output
AT3G16500.1     M E G C P R N R E I G P K L L D L I P Q G R K W Y Q E D K - - - - N N T D Q E K K L E L R L G P P G G - - - - - - - - -
Sb009950_Sorbi1    - - - M G D A A E T T S K T L - - - - - - H N W M A E P R P R P S G Q G D D E E T L Q L S L G L P G G G G G N G A G A G
 
AT3G16500.1     - - - - - - - - - - - - - D E E D H S A I K K K N T - E I R N I K K E T E D K S F H C F N G N H F S P S N - - - - - - -
Sb009950_Sorbi1    L P P A A A W R M L P A R D K E M H S A A A A V D T S S M L S L G - - - - - - - - - - Y S A P A F S P A R S P G K A K G
 
AT3G16500.1     - - - - - - - - - K T T S V P H I S Q - - K R T A P G P V V G W P P V R S F R K N L A S T S S S K L G N E S S H G G Q I
Sb009950_Sorbi1    S P A A A T E N A R L A S T N N A S Q A R Q R S P N T P V I G W P P V R A F R R N L A T S S K A S L - - - E H H N G K -
 
AT3G16500.1     N K S D D G E K Q V E T K K E G M F V K I N M D G V P I G R K V D L N A Y N S Y E Q L S F V V D K L F R G L L A A Q R D
Sb009950_Sorbi1    - - - - K A A R P E E T T K R A P F V K I N M D G I P I G R K I D L N A L G S Y D E L S L S V D K L F R G L L A A Q Q D
 
AT3G16500.1     I S D G Q G - - - - - E E K P I I G L L D G K G E F T L T Y E D N E G D K M L V G D V P W Q M F V S S V K R L R V I K S
Sb009950_Sorbi1    P L D A S T K E C S Q E E V A I S G L L D G T G E Y T L V Y E D Y E G D R V L V G D V P W G M F V S S V K R L R V L K T
 
AT3G16500.1     S E I S S A L T F G C S K Q E K M M H - -
Sb009950_Sorbi1    S D L S S S L T - - A S G R K R T V T E C
 
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