fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G16500.1 TDQEKKLELRLGPPGG at 36/269 in AT3G16500.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm040892 SSEERKLELRLGPPGE in 38/320 AT3G16500.1 1st_1st 0.465454545 Ia
Gm040891 SSEERKLELRLGPPGE in 38/320 AT3G16500.1 not_1st 0.465454545 II
Gm038235 SSEERKLELRLGPPGE in 38/346 AT3G16500.1 not_1st 0.416363636 II
Gm038234 SSEERKLELRLGPPGE in 38/346 AT3G16500.1 not_1st 0.416363636 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G16500.1     MEGCPRNREIGPKLLDLIPQGRKWYQEDKN--NTDQEKKLELRLGPPGGDEEDHSAIKKK
gm040892_Glyma1 MDERSRN-EASPQLLDLISNEREWQMNKRNEGKSSEERKLELRLGPPGEDWSLGGKMK--
gm040891_Glyma1 MDERSRN-EASPQLLDLISNEREWQMNKRNEGKSSEERKLELRLGPPGEDWSLGGKMK--
gm038235_Glyma1 MNERSRD-EASPQLLDLISNEREWQMNKRNEGKSSEERKLELRLGPPGEDWSLGGKMKNN
gm038234_Glyma1 MNERSRD-EASPQLLDLISNEREWQMNKRNEGKSSEERKLELRLGPPGEDWSLGGKMKNN
                *:  .*: * .*:*****.: *:*  :.:*  ::.:*:********** * .  . :*  

AT3G16500.1     NTEIRNIKKE-TEDKSFHCFNGN-------------------H-----------------
gm040892_Glyma1 NTE-----RE-ESLLSLGCFSPN---NGFQSKAS-PWPNYHHHHQGNNNKASSSSFLQ--
gm040891_Glyma1 NTE-----RE-ESLLSLGCFSPN---NGFQSKAS-PWPNYHHHHQGNNNKASSSSFLQ--
gm038235_Glyma1 NTE-----REDQSLLSLGCFSPNINSNAFQSKASHPWPNYHHHGQGNNKKASSSSFLQFP
gm038234_Glyma1 NTE-----REDQSLLSLGCFSPNINSNAFQSKASHPWPNYHHHGQGNNKKASSSSFLQFP
                ***     :*  .  *: **. *                   *                 

AT3G16500.1     ------------------------------FSPSNKTTSV--PHISQKRTAPGPVVGWPP
gm040892_Glyma1 -------------CPKVVVEL-QNGGDGKVFSPSSANTAVSQPNTSQKRTAPAPVVGWPP
gm040891_Glyma1 -------------CPKVVVEL-QNGGDGKVFSPSSANTAVSQPNTSQKRTAPAPVVGWPP
gm038235_Glyma1 SSTQPVMMGKDASCPKVVVELQQNGGDGKVFSPSSANTAVSQPNTSQKRTAPAPVVGWPP
gm038234_Glyma1 SSTQPVMMGKDASCPKVVVELQQNGGDGKVFSPSSANTAVSQPNTSQKRTAPAPVVGWPP
                                              ****. .*:*  *: *******.*******

AT3G16500.1     VRSFRKNLASTSS-SK--LGNESSHGGQINKSDDGEKQVE--TKKEGMFVKINMDGVPIG
gm040892_Glyma1 IRSFRKNLASSSSASK--PPPESQAE-QHNKV-AGKKPVDNYANNKGLFVKINMDGVPIG
gm040891_Glyma1 IRSFRKNLASSSSASK--PPPESQAE-QHNKV-AGKKPVDNYANNKGLFVKINMDGVPIG
gm038235_Glyma1 IRSFRKNLSSSSSASKPPPPPESQAEQQHNKV-AGKKPVDNYANNKGLFVKINMDGVPIG
gm038234_Glyma1 IRSFRKNLSSSSSASKPPPPPESQAEQQHNKV-AGKKPVDNYANNKGLFVKINMDGVPIG
                :*******:*:** **     **.   * **   *:* *:  ::::*:************

AT3G16500.1     RKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDG-----QGEEKPIIGLLDGKGEFTLT
gm040892_Glyma1 RKVDLNAYDSYENLSSAVDELFRGLLAAQRDSSAGGVHNKQEEEKAITGLLDGSGEYTLV
gm040891_Glyma1 RKVDLNAYDSYENLSSAVDELFRGLLAAQRDSSAGGVHNKQEEEKAITGLLDGSGEYTLV
gm038235_Glyma1 RKVDLNAYDSYENLSSAVDELFRGLLAAQRDSSAGGVHNKQEEEKAITGLLDGSGEFTLV
gm038234_Glyma1 RKVDLNAYDSYENLSSAVDELFRGLLAAQRDSSAGGVHNKQEEEKAITGLLDGSGEFTLV
                ********:***:** .**:*********** * *     * ***.* *****.**:**.

AT3G16500.1     YEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEISSALTFGCSKQEKM-----MH
gm040892_Glyma1 YEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEL-SAFTLG-SKQDKIPLDSAMK
gm040891_Glyma1 YEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEL-SAFTLG-SKQDKIPLDSAMK
gm038235_Glyma1 YEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEL-SAFTLG-SKQDKIPLDSAMK
gm038234_Glyma1 YEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEL-SAFTLG-SKQDKIPLDSAMK
                *******:********:****:******:****: **:*:* ***:*:     *:
BoxShade v3.31 C (beta, 970507) Output
AT3G16500.1     M E G C P R N R E I G P K L L D L I P Q G R K W Y Q E D K N - - N T D Q E K K L E L R L G P P G G D E E D H S A I K K K
gm040892_Glyma1    M D E R S R N - E A S P Q L L D L I S N E R E W Q M N K R N E G K S S E E R K L E L R L G P P G E D W S L G G K M K - -
gm040891_Glyma1    M D E R S R N - E A S P Q L L D L I S N E R E W Q M N K R N E G K S S E E R K L E L R L G P P G E D W S L G G K M K - -
gm038235_Glyma1    M N E R S R D - E A S P Q L L D L I S N E R E W Q M N K R N E G K S S E E R K L E L R L G P P G E D W S L G G K M K N N
gm038234_Glyma1    M N E R S R D - E A S P Q L L D L I S N E R E W Q M N K R N E G K S S E E R K L E L R L G P P G E D W S L G G K M K N N
 
AT3G16500.1     N T E I R N I K K E - T E D K S F H C F N G N - - - - - - - - - - - - - - - - - - - H - - - - - - - - - - - - - - - - -
gm040892_Glyma1    N T E - - - - - R E - E S L L S L G C F S P N - - - N G F Q S K A S - P W P N Y H H H H Q G N N N K A S S S S F L Q - -
gm040891_Glyma1    N T E - - - - - R E - E S L L S L G C F S P N - - - N G F Q S K A S - P W P N Y H H H H Q G N N N K A S S S S F L Q - -
gm038235_Glyma1    N T E - - - - - R E D Q S L L S L G C F S P N I N S N A F Q S K A S H P W P N Y H H H G Q G N N K K A S S S S F L Q F P
gm038234_Glyma1    N T E - - - - - R E D Q S L L S L G C F S P N I N S N A F Q S K A S H P W P N Y H H H G Q G N N K K A S S S S F L Q F P
 
AT3G16500.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - F S P S N K T T S V - - P H I S Q K R T A P G P V V G W P P
gm040892_Glyma1    - - - - - - - - - - - - - C P K V V V E L - Q N G G D G K V F S P S S A N T A V S Q P N T S Q K R T A P A P V V G W P P
gm040891_Glyma1    - - - - - - - - - - - - - C P K V V V E L - Q N G G D G K V F S P S S A N T A V S Q P N T S Q K R T A P A P V V G W P P
gm038235_Glyma1    S S T Q P V M M G K D A S C P K V V V E L Q Q N G G D G K V F S P S S A N T A V S Q P N T S Q K R T A P A P V V G W P P
gm038234_Glyma1    S S T Q P V M M G K D A S C P K V V V E L Q Q N G G D G K V F S P S S A N T A V S Q P N T S Q K R T A P A P V V G W P P
 
AT3G16500.1     V R S F R K N L A S T S S - S K - - L G N E S S H G G Q I N K S D D G E K Q V E - - T K K E G M F V K I N M D G V P I G
gm040892_Glyma1    I R S F R K N L A S S S S A S K - - P P P E S Q A E - Q H N K V - A G K K P V D N Y A N N K G L F V K I N M D G V P I G
gm040891_Glyma1    I R S F R K N L A S S S S A S K - - P P P E S Q A E - Q H N K V - A G K K P V D N Y A N N K G L F V K I N M D G V P I G
gm038235_Glyma1    I R S F R K N L S S S S S A S K P P P P P E S Q A E Q Q H N K V - A G K K P V D N Y A N N K G L F V K I N M D G V P I G
gm038234_Glyma1    I R S F R K N L S S S S S A S K P P P P P E S Q A E Q Q H N K V - A G K K P V D N Y A N N K G L F V K I N M D G V P I G
 
AT3G16500.1     R K V D L N A Y N S Y E Q L S F V V D K L F R G L L A A Q R D I S D G - - - - - Q G E E K P I I G L L D G K G E F T L T
gm040892_Glyma1    R K V D L N A Y D S Y E N L S S A V D E L F R G L L A A Q R D S S A G G V H N K Q E E E K A I T G L L D G S G E Y T L V
gm040891_Glyma1    R K V D L N A Y D S Y E N L S S A V D E L F R G L L A A Q R D S S A G G V H N K Q E E E K A I T G L L D G S G E Y T L V
gm038235_Glyma1    R K V D L N A Y D S Y E N L S S A V D E L F R G L L A A Q R D S S A G G V H N K Q E E E K A I T G L L D G S G E F T L V
gm038234_Glyma1    R K V D L N A Y D S Y E N L S S A V D E L F R G L L A A Q R D S S A G G V H N K Q E E E K A I T G L L D G S G E F T L V
 
AT3G16500.1     Y E D N E G D K M L V G D V P W Q M F V S S V K R L R V I K S S E I S S A L T F G C S K Q E K M - - - - - M H
gm040892_Glyma1    Y E D N E G D R M L V G D V P W H M F V S T V K R L R V L K S S E L - S A F T L G - S K Q D K I P L D S A M K
gm040891_Glyma1    Y E D N E G D R M L V G D V P W H M F V S T V K R L R V L K S S E L - S A F T L G - S K Q D K I P L D S A M K
gm038235_Glyma1    Y E D N E G D R M L V G D V P W H M F V S T V K R L R V L K S S E L - S A F T L G - S K Q D K I P L D S A M K
gm038234_Glyma1    Y E D N E G D R M L V G D V P W H M F V S T V K R L R V L K S S E L - S A F T L G - S K Q D K I P L D S A M K
 
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