fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G16770.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt040938 not found in 255aa AT3G16770.1 1st_1st 0.356459330 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G16770.1     MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAADDFWGFYST----SKLHPTN----
pt040938_POPTR_ MCGGAIISDF---VTVKRGRRLTVEDLWSELDPFSEFLRFDYHSNDNNGSKKDPSNLLFP
                *********:   **  :**:**.*:******. :    :.::*.    ** .*:*    

AT3G16770.1     ---------QVNVKEEAVKKEQATE-----PGKRRKRKNVYRGIRKRPWGKWAAEIRDPR
pt040938_POPTR_ QKPSYTIQVQQVITEKVEKPSHATEKENGNKKAQRTRKSVYRGIRQRTWGKWAAEIRDPH
                         *  :.*:. * .:***        :*.**.******:*.***********:

AT3G16770.1     KGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPDLHHPPPPNYTPP-PSSPRSTDQ
pt040938_POPTR_ KGARVWLGTYNTAEEAAKAYDEAAKRIRGDKAKLNF--------PSQTPPTPEAP-----
                **.******:******* *** ***:**********        *. *** *.:*     

AT3G16770.1     PPAKKVCVVSQSESELSQPSFPVECIGFGNGDEFQNLSYGFE-PDYDLKQQISSLESFLE
pt040938_POPTR_ PPAKKRCIVAPETAYVASPFTP----------PLQEPYSGYQNEDYELEEQILKLESFLG
                ***** *:*: . : ::.*  *           :*:   *::  **:*::** .***** 

AT3G16770.1     LDGNTAEQPSQLDESVSEV--------DMWMLDDVIASYE-------
pt040938_POPTR_ L------EPDQMAARLRENGGDNRDSGDLWMLDDLVTHHQYRRQINY
                *      :*.*:   : *         *:*****::: ::
BoxShade v3.31 C (beta, 970507) Output
AT3G16770.1     M C G G A I I S D Y A P L V T K A K G R K L T A E E L W S E L D A S A A D D F W G F Y S T - - - - S K L H P T N - - - -
pt040938_POPTR_    M C G G A I I S D F - - - V T V K R G R R L T V E D L W S E L D P F S E F L R F D Y H S N D N N G S K K D P S N L L F P
 
AT3G16770.1     - - - - - - - - - Q V N V K E E A V K K E Q A T E - - - - - P G K R R K R K N V Y R G I R K R P W G K W A A E I R D P R
pt040938_POPTR_    Q K P S Y T I Q V Q Q V I T E K V E K P S H A T E K E N G N K K A Q R T R K S V Y R G I R Q R T W G K W A A E I R D P H
 
AT3G16770.1     K G V R V W L G T F N T A E E A A M A Y D V A A K Q I R G D K A K L N F P D L H H P P P P N Y T P P - P S S P R S T D Q
pt040938_POPTR_    K G A R V W L G T Y N T A E E A A K A Y D E A A K R I R G D K A K L N F - - - - - - - - P S Q T P P T P E A P - - - - -
 
AT3G16770.1     P P A K K V C V V S Q S E S E L S Q P S F P V E C I G F G N G D E F Q N L S Y G F E - P D Y D L K Q Q I S S L E S F L E
pt040938_POPTR_    P P A K K R C I V A P E T A Y V A S P F T P - - - - - - - - - - P L Q E P Y S G Y Q N E D Y E L E E Q I L K L E S F L G
 
AT3G16770.1     L D G N T A E Q P S Q L D E S V S E V - - - - - - - - D M W M L D D V I A S Y E - - - - - - -
pt040938_POPTR_    L - - - - - - E P D Q M A A R L R E N G G D N R D S G D L W M L D D L V T H H Q Y R R Q I N Y
 
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