fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G16770.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm042266 not found in 223aa AT3G16770.1 1st_1st 0.344497607 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G16770.1     MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAADDFWGFYSTSKLHPTNQVNVKEEA
gm042266_Glyma1 MCGGAIISDF---IGVKRGRNLAAQELWSELDPFS--DLLGFDTTTT--TTNQPPLPDKK
                *********:   :   :**:*:*:*******. :  *: ** :*:.  .***  : :: 

AT3G16770.1     V------KKEQATEPGKR---RKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTA
gm042266_Glyma1 VVSSCEKKKKKSVSAEKKSGGRARKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFPTA
                *      **:::... *:   * *********:*************:********** **

AT3G16770.1     EEAAMAYDVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTDQPPAKKVCVVSQSES
gm042266_Glyma1 EEAARAYDDAAKRIRGDKAKLNFPAT--APPPSKKQRCLSPDTTTEQS-------SSSQS
                **** *** ***:***********    .***. .    ** :* : .       *.*:*

AT3G16770.1     ELSQPSFPVECIGFGNGDEFQNLSYGFEPDYDLKQQISSLESFLELDGNTAEQPSQLDES
gm042266_Glyma1 TTGSTGSPPSAAFHGGGDEL-----------DLKQ----LERFLGLDNMGAEW-DNMD--
                  .... * ..  .*.***:           ****    ** ** **.  **  .::*  

AT3G16770.1     VSEVDMWMLDDVIASYE----
gm042266_Glyma1 ----DLWMLDDVVVPNRHLIY
                    *:******:.. .
BoxShade v3.31 C (beta, 970507) Output
AT3G16770.1     M C G G A I I S D Y A P L V T K A K G R K L T A E E L W S E L D A S A A D D F W G F Y S T S K L H P T N Q V N V K E E A
gm042266_Glyma1    M C G G A I I S D F - - - I G V K R G R N L A A Q E L W S E L D P F S - - D L L G F D T T T T - - T T N Q P P L P D K K
 
AT3G16770.1     V - - - - - - K K E Q A T E P G K R - - - R K R K N V Y R G I R K R P W G K W A A E I R D P R K G V R V W L G T F N T A
gm042266_Glyma1    V V S S C E K K K K K S V S A E K K S G G R A R K N V Y R G I R Q R P W G K W A A E I R D P H K G V R V W L G T F P T A
 
AT3G16770.1     E E A A M A Y D V A A K Q I R G D K A K L N F P D L H H P P P P N Y T P P P S S P R S T D Q P P A K K V C V V S Q S E S
gm042266_Glyma1    E E A A R A Y D D A A K R I R G D K A K L N F P A T - - A P P P S K K Q R C L S P D T T T E Q S - - - - - - - S S S Q S
 
AT3G16770.1     E L S Q P S F P V E C I G F G N G D E F Q N L S Y G F E P D Y D L K Q Q I S S L E S F L E L D G N T A E Q P S Q L D E S
gm042266_Glyma1    T T G S T G S P P S A A F H G G G D E L - - - - - - - - - - - D L K Q - - - - L E R F L G L D N M G A E W - D N M D - -
 
AT3G16770.1     V S E V D M W M L D D V I A S Y E - - - -
gm042266_Glyma1    - - - - D L W M L D D V V V P N R H L I Y
 
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