fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G16857.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt042456 not found in 670aa AT4G16110.1 not_not 0.451197053 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G16857.1     MMNPSHGRGLGSAGGSSSGRNQGG---GGETVVEMFPSGLRVLVVDDDPTCLMILERMLR
pt042456_POPTR_ MMN------LANCKGSMSTATSGGVWKASDGASDQFPAGLRVLVVDDDPTCLVILEKMLR
                ***      *... ** *  ..**   ..: . : **:**************:***:***

AT3G16857.1     TCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSA
pt042456_POPTR_ TCRYEVTKCNRAEIALSLLRENKNGYDIVISDVHMPDMDGFKLLEQIGLEMDLPVIMMSA
                ** **********:******:**:*:*******************::*************

AT3G16857.1     DDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVVRKRRSEWSVPEHSGSIEETGERQQ
pt042456_POPTR_ DDGKNVVMKGVTHGACDYLIKPIRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGGDRQQ
                **.*.**:******* ******:*:**************:.**.  *:***:** *:***

AT3G16857.1     QQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWRSSSRKRKDEEGEEQGDDKDEDASNLKK
pt042456_POPTR_ KQ------------PEDA--DYSSSANEG-SWKNSKR-RKDE--EEEAEERD-DTSALKK
                :*             ***  * ***.*** .*:.*.* ****  **:.:::* *:* ***

AT3G16857.1     PRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQKYRIYLRRLGG
pt042456_POPTR_ PRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSG
                *********************::*****************************:*****.*

AT3G16857.1     VSQHQGNLNNSFMTGQDASFGPLSTLNGFDLQALAVTGQLPAQSLAQLQAAGLGRPAMVS
pt042456_POPTR_ VSQHQNGMGSSFISPQEATYGPLSSLNGLDLQTLATAGQLPAQSLATLQAAGLGRSTAKP
                *****..:..**:: *:*::****:***:***:**.:********* ********.:  .

AT3G16857.1     KSGLPVSSIVDERSIFSFDNTKTRFGEGLGHHGQQPQQQ-----PQMNLLHGVPTGLQQQ
pt042456_POPTR_ RMPMP---IVDQRNLFSFENPKLRFGEG--------QQQHLNNGKQTNLLHGIPTTME--
                :  :*   ***:*.:***:*.* *****        ***      * *****:** ::  

AT3G16857.1     LPMGNRMSIQQQIAAVRAGNSVQNNGMLMPLAGQQSLPRGP---------PPMLTSSQSS
pt042456_POPTR_ ---------PKQLANLHH----SAHSLLMQMSQQQS--RGQILNETTHSHVPRLS---SS
                          :*:* ::     . :.:** :: ***  **           * *:   **

AT3G16857.1     IRQPMLSNRISERSGFSGRNNIPESSRVLPTSYTNLTTQHSSSSMPYNNFQPELPVNSFP
pt042456_POPTR_ IGQPIASNALA--SGVLTRNGLAENGRGI--GFNPVSQSSTLLNFPLNT-TAELTATSFP
                * **: ** ::  **.  **.:.*..* :  .:. :: . :  .:* *.  .**...***

AT3G16857.1     LASAPGISVPVRKATSYQEEVNSS---EAGFTTPSYDMFTT----RQNDWDLRNIGIAFD
pt042456_POPTR_ LGSAAEVPSLTSKGT-FQEEISSEIKGTGGF-MPSYDIFSDLQQHRSHDWELQNVGMTFN
                *.**. :.  . *.* :***:.*.    .**  ****:*:     *.:**:*:*:*::*:

AT3G16857.1     SHQDSESA--------------AFSASEAYSSSSMSRHNTTVA---------ATEHGRNH
pt042456_POPTR_ GSQQSNSVQSNLDVAPSVLSHQGFSSCQ---SNGQSRNNISVVGKPMFSAGDATEH-VNA
                . *:*:*.              .**:.:   *.. **:* :*.         ****  * 

AT3G16857.1     QQPPSGMVQH--HQVYADGNGGSVRVKSERVA-TDTATMAFHEQYSNQEDLMSALLKQV-
pt042456_POPTR_ QS-----LEHPINTFFAE---NSMRVKTERVPDANPQTALFNGQFG-QEDLMSALLKQQQ
                *.     ::*  : .:*:   .*:***:***. ::. *  *: *:. ***********  

AT3G16857.1     --------------------------
pt042456_POPTR_ QQQQGGIGLAENEFDFDGYSLDNIPV
BoxShade v3.31 C (beta, 970507) Output
AT3G16857.1     M M N P S H G R G L G S A G G S S S G R N Q G G - - - G G E T V V E M F P S G L R V L V V D D D P T C L M I L E R M L R
pt042456_POPTR_    M M N - - - - - - L A N C K G S M S T A T S G G V W K A S D G A S D Q F P A G L R V L V V D D D P T C L V I L E K M L R
 
AT3G16857.1     T C L Y E V T K C N R A E M A L S L L R K N K H G F D I V I S D V H M P D M D G F K L L E H V G L E M D L P V I M M S A
pt042456_POPTR_    T C R Y E V T K C N R A E I A L S L L R E N K N G Y D I V I S D V H M P D M D G F K L L E Q I G L E M D L P V I M M S A
 
AT3G16857.1     D D S K S V V L K G V T H G A V D Y L I K P V R M E A L K N I W Q H V V R K R R S E W S V P E H S G S I E E T G E R Q Q
pt042456_POPTR_    D D G K N V V M K G V T H G A C D Y L I K P I R I E A L K N I W Q H V V R K R K N E W K D L E Q S G S V E E G G D R Q Q
 
AT3G16857.1     Q Q H R G G G G G A A V S G G E D A V D D N S S S V N E G N N W R S S S R K R K D E E G E E Q G D D K D E D A S N L K K
pt042456_POPTR_    K Q - - - - - - - - - - - - P E D A - - D Y S S S A N E G - S W K N S K R - R K D E - - E E E A E E R D - D T S A L K K
 
AT3G16857.1     P R V V W S V E L H Q Q F V A A V N Q L G V E K A V P K K I L E L M N V P G L T R E N V A S H L Q K Y R I Y L R R L G G
pt042456_POPTR_    P R V V W S V E L H Q Q F V A A V N Q L G I D K A V P K K I L E L M N V P G L T R E N V A S H L Q K Y R L Y L R R L S G
 
AT3G16857.1     V S Q H Q G N L N N S F M T G Q D A S F G P L S T L N G F D L Q A L A V T G Q L P A Q S L A Q L Q A A G L G R P A M V S
pt042456_POPTR_    V S Q H Q N G M G S S F I S P Q E A T Y G P L S S L N G L D L Q T L A T A G Q L P A Q S L A T L Q A A G L G R S T A K P
 
AT3G16857.1     K S G L P V S S I V D E R S I F S F D N T K T R F G E G L G H H G Q Q P Q Q Q - - - - - P Q M N L L H G V P T G L Q Q Q
pt042456_POPTR_    R M P M P - - - I V D Q R N L F S F E N P K L R F G E G - - - - - - - - Q Q Q H L N N G K Q T N L L H G I P T T M E - -
 
AT3G16857.1     L P M G N R M S I Q Q Q I A A V R A G N S V Q N N G M L M P L A G Q Q S L P R G P - - - - - - - - - P P M L T S S Q S S
pt042456_POPTR_    - - - - - - - - - P K Q L A N L H H - - - - S A H S L L M Q M S Q Q Q S - - R G Q I L N E T T H S H V P R L S - - - S S
 
AT3G16857.1     I R Q P M L S N R I S E R S G F S G R N N I P E S S R V L P T S Y T N L T T Q H S S S S M P Y N N F Q P E L P V N S F P
pt042456_POPTR_    I G Q P I A S N A L A - - S G V L T R N G L A E N G R G I - - G F N P V S Q S S T L L N F P L N T - T A E L T A T S F P
 
AT3G16857.1     L A S A P G I S V P V R K A T S Y Q E E V N S S - - - E A G F T T P S Y D M F T T - - - - R Q N D W D L R N I G I A F D
pt042456_POPTR_    L G S A A E V P S L T S K G T - F Q E E I S S E I K G T G G F - M P S Y D I F S D L Q Q H R S H D W E L Q N V G M T F N
 
AT3G16857.1     S H Q D S E S A - - - - - - - - - - - - - - A F S A S E A Y S S S S M S R H N T T V A - - - - - - - - - A T E H G R N H
pt042456_POPTR_    G S Q Q S N S V Q S N L D V A P S V L S H Q G F S S C Q - - - S N G Q S R N N I S V V G K P M F S A G D A T E H - V N A
 
AT3G16857.1     Q Q P P S G M V Q H - - H Q V Y A D G N G G S V R V K S E R V A - T D T A T M A F H E Q Y S N Q E D L M S A L L K Q V -
pt042456_POPTR_    Q S - - - - - L E H P I N T F F A E - - - N S M R V K T E R V P D A N P Q T A L F N G Q F G - Q E D L M S A L L K Q Q Q
 
AT3G16857.1     - - - - - - - - - - - - - - - - - - - - - - - - - -
pt042456_POPTR_    Q Q Q Q G G I G L A E N E F D F D G Y S L D N I P V
 
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