fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G17100.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm019296 not found in 210aa AT3G17100.2 not_1st 0.506369426 II
Gm045884 not found in 214aa AT3G17100.2 not_1st 0.506369426 II
Pt040987 not found in 231aa AT3G17100.2 not_1st 0.563694267 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G17100.2     --MES--ISPVSNQLLQPTTTSSNSDRSRRKRKKKSSPSSV-EKSPSPSISLEKWRSEKQ
gm045884_Glyma1 --MASSPSSSSSSSSSMVSNPVPNTDRSRDAKRRKKKAQLR-QQLRQEDQSNPKWKSQAQ
pt040987_POPTR_ MMMAS--STTTTSVAAVNTNANINTDRTRRKKKKKSLLQQHQSKQNQNSQSHAKWKTEAQ
gm019296_Glyma0 --MA--------SSSSMISNPVPNTDRSRDAKRRKKKAQLRQQQQRQEDQSNPKWKSQAQ
                  *         .     :..  *:**:*  :::*.  .   .:  . . *  **::: *

AT3G17100.2     QQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILS
gm045884_Glyma1 QQIYSSKLRQALARVNL-------GSSAPPRRGKAVRDAADRVLAVTAKGRTRWSRAILT
pt040987_POPTR_ QQIYSSKLIQALSQVNLN-----PSSSSAPRQGRAVREVADRALAFAAKGKTRWSRAILT
gm019296_Glyma0 QQIYSSKLRQALARVNL-------GLAPPPRRGKAVRDAADRVLAVTAKGMTRWSRAILT
                *****:** :** .:.:       . :. ** *:***:.***.**.:*:* * ******:

AT3G17100.2     KAVKLKFRK--HKRQRI---SNPTTTTLTTGSI--RSKKQRATVLRLKAKGLPAVQRKVK
gm045884_Glyma1 NRLKLKFTK--HKRQRV---------TITTPPT--RSKKPRVSVYRLKGKGSPGVQRKVR
pt040987_POPTR_ NRIKLKFRKQQHKRQRLASSSSSGSTVVTTASNSRSSRKHKVSVLRLKGKGLPAVQRKVR
gm019296_Glyma0 NRLKLKFTK--HKRQR-----------LTTPPT--RSKKPRVSVYRLKGKGSPGVQRKVR
                : :**** *  *****           :** .    *:* :.:* ***.** *.*****:

AT3G17100.2     VLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAIL----------SAVSSSPPPPT
gm045884_Glyma1 FLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMSALFNLLSG-----GGAASTSAPPS
pt040987_POPTR_ VLGRLVPGCRKQPLPIILEEATDYIAALEMQVKAMSAIAELLSR---SSSGAGSSLEPMS
gm019296_Glyma0 FLARLVPGCRKEPLPVILEEAIDYIPALEMQVRAMSALFNLLSGSSSSSGAAASPSAPPS
                .*.********:.**::***: ***.*:***:::*:*:           ....*.  * :

AT3G17100.2     PGHEGGQTHMLG
gm045884_Glyma1 SS----------
pt040987_POPTR_ S-----------
gm019296_Glyma0 SS----------
                .
BoxShade v3.31 C (beta, 970507) Output
AT3G17100.2     - - M E S - - I S P V S N Q L L Q P T T T S S N S D R S R R K R K K K S S P S S V - E K S P S P S I S L E K W R S E K Q
gm045884_Glyma1    - - M A S S P S S S S S S S S S M V S N P V P N T D R S R D A K R R K K K A Q L R - Q Q L R Q E D Q S N P K W K S Q A Q
pt040987_POPTR_    M M M A S - - S T T T T S V A A V N T N A N I N T D R T R R K K K K K S L L Q Q H Q S K Q N Q N S Q S H A K W K T E A Q
gm019296_Glyma0    - - M A - - - - - - - - S S S S M I S N P V P N T D R S R D A K R R K K K A Q L R Q Q Q Q R Q E D Q S N P K W K S Q A Q
 
AT3G17100.2     Q Q I Y S T K L V H A L R E L R I S Q Q P S S S S S S S I P R G G R A V R E V A D R A L A V A A R G K T L W S R A I L S
gm045884_Glyma1    Q Q I Y S S K L R Q A L A R V N L - - - - - - - G S S A P P R R G K A V R D A A D R V L A V T A K G R T R W S R A I L T
pt040987_POPTR_    Q Q I Y S S K L I Q A L S Q V N L N - - - - - P S S S S A P R Q G R A V R E V A D R A L A F A A K G K T R W S R A I L T
gm019296_Glyma0    Q Q I Y S S K L R Q A L A R V N L - - - - - - - G L A P P P R R G K A V R D A A D R V L A V T A K G M T R W S R A I L T
 
AT3G17100.2     K A V K L K F R K - - H K R Q R I - - - S N P T T T T L T T G S I - - R S K K Q R A T V L R L K A K G L P A V Q R K V K
gm045884_Glyma1    N R L K L K F T K - - H K R Q R V - - - - - - - - - T I T T P P T - - R S K K P R V S V Y R L K G K G S P G V Q R K V R
pt040987_POPTR_    N R I K L K F R K Q Q H K R Q R L A S S S S S G S T V V T T A S N S R S S R K H K V S V L R L K G K G L P A V Q R K V R
gm019296_Glyma0    N R L K L K F T K - - H K R Q R - - - - - - - - - - - L T T P P T - - R S K K P R V S V Y R L K G K G S P G V Q R K V R
 
AT3G17100.2     V L S R L V P G C R K Q S L P V V L E E T T D Y I A A M E M Q I R T M T A I L - - - - - - - - - - S A V S S S P P P P T
gm045884_Glyma1    F L G R L V P G C R K E P L P V I L E E A I D Y I P A L E M Q V R A M S A L F N L L S G - - - - - G G A A S T S A P P S
pt040987_POPTR_    V L G R L V P G C R K Q P L P I I L E E A T D Y I A A L E M Q V K A M S A I A E L L S R - - - S S S G A G S S L E P M S
gm019296_Glyma0    F L A R L V P G C R K E P L P V I L E E A I D Y I P A L E M Q V R A M S A L F N L L S G S S S S S G A A A S P S A P P S
 
AT3G17100.2     P G H E G G Q T H M L G
gm045884_Glyma1    S S - - - - - - - - - -
pt040987_POPTR_    S - - - - - - - - - - -
gm019296_Glyma0    S S - - - - - - - - - -
 
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