fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G17100.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm042156 not found in 202aa AT3G17100.2 1st_1st 0.512738853 Ia
Pt035124 not found in 229aa AT3G17100.2 1st_1st 0.570063694 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G17100.2     MESISPVSNQLL----QPTTTSSNSDRSR---RKRKKKSSPSSVEKSP-SPSISLEKWRS
pt035124_POPTR_ ---MEPSSSSAVAAAIVSTNANINTDRTR---RKKKKKSVLQQHQSKQNQNSQSHAKWKT
gm042156_Glyma1 ------MSSSLI--------ANPTADRSRDSHRTKKKKKSLKQHQL---QHEQSHAKWKS
                       *.. :        :. .:**:*   *.:***.  .. :    . . *  **::

AT3G17100.2     EKQQQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRA
pt035124_POPTR_ EAQQQVYSSKLIQALSQVNLN-----PSTSSAPRQGRAVREVADRALAFAAKGKTRWSRA
gm042156_Glyma1 HAQQQLYSSKLHHALARVNI--------SGDAPRRGRAVREAADRVLAVAAKGRTRWSRA
                . ***:**:** :** .:.:        :.. ** ******.***.**.**:*:* ****

AT3G17100.2     ILSKAVKLKFRK--HKRQRI-----SNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQR
pt035124_POPTR_ ILTSRIKLKFRKQQHKRQRLASSSSSSPGSTT-GSSSRSSRKHKVSVLRLKAKGLPAVQR
gm042156_Glyma1 ILTNRLKLKFRKPIHKRQKVV----VGPG---------RPKKARFSVLRLKGKTLPAVQR
                **:. :******  ****::      .*           .:* : :*****.* ******

AT3G17100.2     KVKVLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAIL-------SAVSSSPPPPT
pt035124_POPTR_ KVRVLGRLVPGCLKQPLPVILEEATDYIAALEMQVKTMTAIAELLSRSTSEASSTSEPMT
gm042156_Glyma1 KVRVLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMQALADLLLGSSSASTSAAAPPS
                **:**.****** *:.***:***: ***.*:***:::* *:        *  :*:. * :

AT3G17100.2     PGHEGGQTHMLG
pt035124_POPTR_ S-----------
gm042156_Glyma1 ------------
BoxShade v3.31 C (beta, 970507) Output
AT3G17100.2     M E S I S P V S N Q L L - - - - Q P T T T S S N S D R S R - - - R K R K K K S S P S S V E K S P - S P S I S L E K W R S
pt035124_POPTR_    - - - M E P S S S S A V A A A I V S T N A N I N T D R T R - - - R K K K K K S V L Q Q H Q S K Q N Q N S Q S H A K W K T
gm042156_Glyma1    - - - - - - M S S S L I - - - - - - - - A N P T A D R S R D S H R T K K K K K S L K Q H Q L - - - Q H E Q S H A K W K S
 
AT3G17100.2     E K Q Q Q I Y S T K L V H A L R E L R I S Q Q P S S S S S S S I P R G G R A V R E V A D R A L A V A A R G K T L W S R A
pt035124_POPTR_    E A Q Q Q V Y S S K L I Q A L S Q V N L N - - - - - P S T S S A P R Q G R A V R E V A D R A L A F A A K G K T R W S R A
gm042156_Glyma1    H A Q Q Q L Y S S K L H H A L A R V N I - - - - - - - - S G D A P R R G R A V R E A A D R V L A V A A K G R T R W S R A
 
AT3G17100.2     I L S K A V K L K F R K - - H K R Q R I - - - - - S N P T T T T L T T G S I R S K K Q R A T V L R L K A K G L P A V Q R
pt035124_POPTR_    I L T S R I K L K F R K Q Q H K R Q R L A S S S S S S P G S T T - G S S S R S S R K H K V S V L R L K A K G L P A V Q R
gm042156_Glyma1    I L T N R L K L K F R K P I H K R Q K V V - - - - V G P G - - - - - - - - - R P K K A R F S V L R L K G K T L P A V Q R
 
AT3G17100.2     K V K V L S R L V P G C R K Q S L P V V L E E T T D Y I A A M E M Q I R T M T A I L - - - - - - - S A V S S S P P P P T
pt035124_POPTR_    K V R V L G R L V P G C L K Q P L P V I L E E A T D Y I A A L E M Q V K T M T A I A E L L S R S T S E A S S T S E P M T
gm042156_Glyma1    K V R V L G R L V P G C R K E P L P V I L E E A I D Y I P A L E M Q V R A M Q A L A D L L L G S S S A S T S A A A P P S
 
AT3G17100.2     P G H E G G Q T H M L G
pt035124_POPTR_    S - - - - - - - - - - -
gm042156_Glyma1    - - - - - - - - - - - -
 
0