Input
| Putative repression domain
|
|
AT3G17100.2 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt040987 |
not found in 231aa |
AT3G17100.2 |
not_1st |
0.563694267 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT3G17100.2 --MESISPVSNQLLQPTTTSSNSDRSRRKRKKKSSPSSVE-KSPSPSISLEKWRSEKQQQ
pt040987_POPTR_ MMMASSTTTTSVAAVNTNANINTDRTRRKKKKKSLLQQHQSKQNQNSQSHAKWKTEAQQQ
* * :..:. *.:. *:**:***:**** .. : *. . * * **::* ***
AT3G17100.2 IYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKA
pt040987_POPTR_ IYSSKLIQALSQVNLN--PSSSSA---PRQGRAVREVADRALAFAAKGKTRWSRAILTNR
***:**::** ::.:. *****: ** *************.**:*** ******::
AT3G17100.2 VKLKFRK--HKRQRI-----SNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVL
pt040987_POPTR_ IKLKFRKQQHKRQRLASSSSSGSTVVTTASNSRSSRKHKVSVLRLKGKGLPAVQRKVRVL
:****** *****: *..*..* ::.* *:*::.:*****.**********:**
AT3G17100.2 SRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAILSAVSSSPPPPTPGHEGGQTHMLG
pt040987_POPTR_ GRLVPGCRKQPLPIILEEATDYIAALEMQVKAMSAIAELLSRSSSGAGSSLEPMSS----
.*********.**::***:******:***:::*:** . :* *.. . .. * .:
BoxShade v3.31 C (beta, 970507) Output
AT3G17100.2 |
- |
- |
M |
E |
S |
I |
S |
P |
V |
S |
N |
Q |
L |
L |
Q |
P |
T |
T |
T |
S |
S |
N |
S |
D |
R |
S |
R |
R |
K |
R |
K |
K |
K |
S |
S |
P |
S |
S |
V |
E |
- |
K |
S |
P |
S |
P |
S |
I |
S |
L |
E |
K |
W |
R |
S |
E |
K |
Q |
Q |
Q |
pt040987_POPTR_ |
M |
M |
M |
A |
S |
S |
T |
T |
T |
T |
S |
V |
A |
A |
V |
N |
T |
N |
A |
N |
I |
N |
T |
D |
R |
T |
R |
R |
K |
K |
K |
K |
K |
S |
L |
L |
Q |
Q |
H |
Q |
S |
K |
Q |
N |
Q |
N |
S |
Q |
S |
H |
A |
K |
W |
K |
T |
E |
A |
Q |
Q |
Q |
|
AT3G17100.2 |
I |
Y |
S |
T |
K |
L |
V |
H |
A |
L |
R |
E |
L |
R |
I |
S |
Q |
Q |
P |
S |
S |
S |
S |
S |
S |
S |
I |
P |
R |
G |
G |
R |
A |
V |
R |
E |
V |
A |
D |
R |
A |
L |
A |
V |
A |
A |
R |
G |
K |
T |
L |
W |
S |
R |
A |
I |
L |
S |
K |
A |
pt040987_POPTR_ |
I |
Y |
S |
S |
K |
L |
I |
Q |
A |
L |
S |
Q |
V |
N |
L |
N |
- |
- |
P |
S |
S |
S |
S |
A |
- |
- |
- |
P |
R |
Q |
G |
R |
A |
V |
R |
E |
V |
A |
D |
R |
A |
L |
A |
F |
A |
A |
K |
G |
K |
T |
R |
W |
S |
R |
A |
I |
L |
T |
N |
R |
|
AT3G17100.2 |
V |
K |
L |
K |
F |
R |
K |
- |
- |
H |
K |
R |
Q |
R |
I |
- |
- |
- |
- |
- |
S |
N |
P |
T |
T |
T |
T |
L |
T |
T |
G |
S |
I |
R |
S |
K |
K |
Q |
R |
A |
T |
V |
L |
R |
L |
K |
A |
K |
G |
L |
P |
A |
V |
Q |
R |
K |
V |
K |
V |
L |
pt040987_POPTR_ |
I |
K |
L |
K |
F |
R |
K |
Q |
Q |
H |
K |
R |
Q |
R |
L |
A |
S |
S |
S |
S |
S |
G |
S |
T |
V |
V |
T |
T |
A |
S |
N |
S |
R |
S |
S |
R |
K |
H |
K |
V |
S |
V |
L |
R |
L |
K |
G |
K |
G |
L |
P |
A |
V |
Q |
R |
K |
V |
R |
V |
L |
|
AT3G17100.2 |
S |
R |
L |
V |
P |
G |
C |
R |
K |
Q |
S |
L |
P |
V |
V |
L |
E |
E |
T |
T |
D |
Y |
I |
A |
A |
M |
E |
M |
Q |
I |
R |
T |
M |
T |
A |
I |
L |
S |
A |
V |
S |
S |
S |
P |
P |
P |
P |
T |
P |
G |
H |
E |
G |
G |
Q |
T |
H |
M |
L |
G |
pt040987_POPTR_ |
G |
R |
L |
V |
P |
G |
C |
R |
K |
Q |
P |
L |
P |
I |
I |
L |
E |
E |
A |
T |
D |
Y |
I |
A |
A |
L |
E |
M |
Q |
V |
K |
A |
M |
S |
A |
I |
A |
E |
L |
L |
S |
R |
S |
S |
S |
G |
A |
G |
S |
S |
L |
E |
P |
M |
S |
S |
- |
- |
- |
- |
|
|