fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G17100.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm019296 not found in 210aa AT3G17100.2 not_1st 0.506369426 II
Gm045884 not found in 214aa AT3G17100.2 not_1st 0.506369426 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G17100.2     M---------ESISPVSNQLLQPTTTSSNSDRSR--RKRKKKS----SPSSVEKSPSPSI
gm019296_Glyma0 MA--------SSSSMISNPV-------PNTDRSRDAKRRKKKAQLRQQQQRQEDQSNP--
gm045884_Glyma1 MASSPSSSSSSSSSMVSNPV-------PNTDRSRDAKRRKKKAQLR-QQLRQEDQSNP--
                *         .* * :** :       .*:****  ::****:    .    *....*  

AT3G17100.2     SLEKWRSEKQQQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARG
gm019296_Glyma0 ---KWKSQAQQQIYSSKLRQALARVNLGLAPP-------PRRGKAVRDAADRVLAVTAKG
gm045884_Glyma1 ---KWKSQAQQQIYSSKLRQALARVNLGSSAP-------PRRGKAVRDAADRVLAVTAKG
                   **:*: ******:** :** .:.:.  ..       ** *:***:.***.***:*:*

AT3G17100.2     KTLWSRAILSKAVKLKFRKHKRQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQR
gm019296_Glyma0 MTRWSRAILTNRLKLKFTKHKRQR--------LTTPPTRSKKPRVSVYRLKGKGSPGVQR
gm045884_Glyma1 RTRWSRAILTNRLKLKFTKHKRQRV------TITTPPTRSKKPRVSVYRLKGKGSPGVQR
                 * ******:: :**** ******        :** . **** *.:* ***.** *.***

AT3G17100.2     KVKVLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAILS-----------AVSSSP
gm019296_Glyma0 KVRFLARLVPGCRKEPLPVILEEAIDYIPALEMQVRAMSALFNLLSGSSSSSGAAASPSA
gm045884_Glyma1 KVRFLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMSALFNLLSG-----GGAASTSA
                **:.*.********:.***:***: ***.*:***:*:*:*::.           *.*.*.

AT3G17100.2     PPPTPGHEGGQTHMLG
gm019296_Glyma0 PPSSS-----------
gm045884_Glyma1 PPSSS-----------
                **.:.
BoxShade v3.31 C (beta, 970507) Output
AT3G17100.2     M - - - - - - - - - E S I S P V S N Q L L Q P T T T S S N S D R S R - - R K R K K K S - - - - S P S S V E K S P S P S I
gm019296_Glyma0    M A - - - - - - - - S S S S M I S N P V - - - - - - - P N T D R S R D A K R R K K K A Q L R Q Q Q Q R Q E D Q S N P - -
gm045884_Glyma1    M A S S P S S S S S S S S S M V S N P V - - - - - - - P N T D R S R D A K R R K K K A Q L R - Q Q L R Q E D Q S N P - -
 
AT3G17100.2     S L E K W R S E K Q Q Q I Y S T K L V H A L R E L R I S Q Q P S S S S S S S I P R G G R A V R E V A D R A L A V A A R G
gm019296_Glyma0    - - - K W K S Q A Q Q Q I Y S S K L R Q A L A R V N L G L A P P - - - - - - - P R R G K A V R D A A D R V L A V T A K G
gm045884_Glyma1    - - - K W K S Q A Q Q Q I Y S S K L R Q A L A R V N L G S S A P - - - - - - - P R R G K A V R D A A D R V L A V T A K G
 
AT3G17100.2     K T L W S R A I L S K A V K L K F R K H K R Q R I S N P T T T T L T T G S I R S K K Q R A T V L R L K A K G L P A V Q R
gm019296_Glyma0    M T R W S R A I L T N R L K L K F T K H K R Q R - - - - - - - - L T T P P T R S K K P R V S V Y R L K G K G S P G V Q R
gm045884_Glyma1    R T R W S R A I L T N R L K L K F T K H K R Q R V - - - - - - T I T T P P T R S K K P R V S V Y R L K G K G S P G V Q R
 
AT3G17100.2     K V K V L S R L V P G C R K Q S L P V V L E E T T D Y I A A M E M Q I R T M T A I L S - - - - - - - - - - - A V S S S P
gm019296_Glyma0    K V R F L A R L V P G C R K E P L P V I L E E A I D Y I P A L E M Q V R A M S A L F N L L S G S S S S S G A A A S P S A
gm045884_Glyma1    K V R F L G R L V P G C R K E P L P V I L E E A I D Y I P A L E M Q V R A M S A L F N L L S G - - - - - G G A A S T S A
 
AT3G17100.2     P P P T P G H E G G Q T H M L G
gm019296_Glyma0    P P S S S - - - - - - - - - - -
gm045884_Glyma1    P P S S S - - - - - - - - - - -
 
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