fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G17100.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm023956 not found in 202aa AT3G06590.2 not_not 0.477707006 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G17100.2     MESISPVSNQLLQPTTTSSNSDRSRRKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYS
gm023956_Glyma0 ------MSSSLIANPTADRSRDSHRTKKKKKSIKQHQQQHDA------KWKTHAQQQLYS
                      :*..*:  .*:. . *  * *:****  .  ::  :      **::. ***:**

AT3G17100.2     TKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKL
gm023956_Glyma0 SKLHQALARVNI--------SGDAPRRGRAVRDAADRVLAVAAKGRTRWSRAILTNRLKV
                :** :** .:.*        *.. ** *****:.***.*****:*:* ******:: :*:

AT3G17100.2     KFRK--HKRQRISNPTTTTLTTGSIRSKKQ-RATVLRLKAKGLPAVQRKVKVLSRLVPGC
gm023956_Glyma0 KFRKPVHKRQKV-------VVVGPGRPKKKARFSVLRLRGKTLPAVQRKVRVLGRLVPGC
                ****  ****::       :..*. *.**: * :****:.* ********:**.******

AT3G17100.2     RKQSLPVVLEETTDYIAAMEMQIRTMTAIL--------SAVSSSPPPPTPGHEGGQTHML
gm023956_Glyma0 RKEPLPVILEEAIDYIPALEMQVRAMQALADLLLGSSSASTSATAAPPS-----------
                **:.***:***: ***.*:***:*:* *:         ::.*::..**:           

AT3G17100.2     G
gm023956_Glyma0 -
BoxShade v3.31 C (beta, 970507) Output
AT3G17100.2     M E S I S P V S N Q L L Q P T T T S S N S D R S R R K R K K K S S P S S V E K S P S P S I S L E K W R S E K Q Q Q I Y S
gm023956_Glyma0    - - - - - - M S S S L I A N P T A D R S R D S H R T K K K K K S I K Q H Q Q Q H D A - - - - - - K W K T H A Q Q Q L Y S
 
AT3G17100.2     T K L V H A L R E L R I S Q Q P S S S S S S S I P R G G R A V R E V A D R A L A V A A R G K T L W S R A I L S K A V K L
gm023956_Glyma0    S K L H Q A L A R V N I - - - - - - - - S G D A P R R G R A V R D A A D R V L A V A A K G R T R W S R A I L T N R L K V
 
AT3G17100.2     K F R K - - H K R Q R I S N P T T T T L T T G S I R S K K Q - R A T V L R L K A K G L P A V Q R K V K V L S R L V P G C
gm023956_Glyma0    K F R K P V H K R Q K V - - - - - - - V V V G P G R P K K K A R F S V L R L R G K T L P A V Q R K V R V L G R L V P G C
 
AT3G17100.2     R K Q S L P V V L E E T T D Y I A A M E M Q I R T M T A I L - - - - - - - - S A V S S S P P P P T P G H E G G Q T H M L
gm023956_Glyma0    R K E P L P V I L E E A I D Y I P A L E M Q V R A M Q A L A D L L L G S S S A S T S A T A A P P S - - - - - - - - - - -
 
AT3G17100.2     G
gm023956_Glyma0    -
 
0