fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G17100.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm042156 not found in 202aa AT3G17100.2 1st_1st 0.512738853 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G17100.2     MESISPVSNQLLQPTTTSSNSDRSRRKRKKKS-SPSSVEKSPSPSISLEKWRSEKQQQIY
gm042156_Glyma1 ------MSSSLIANPTADRSRDSHRTKKKKKSLKQHQLQHEQSHA----KWKSHAQQQLY
                      :*..*:  .*:. . *  * *:**** .  .:::. * :    **:*. ***:*

AT3G17100.2     STKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVK
gm042156_Glyma1 SSKLHHALARVNI--------SGDAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLK
                *:** *** .:.*        *.. ** ******.***.*****:*:* ******:: :*

AT3G17100.2     LKFRK--HKRQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGC
gm042156_Glyma1 LKFRKPIHKRQKV--------VVGPGRPKKARFSVLRLKGKTLPAVQRKVRVLGRLVPGC
                *****  ****::        ..*. *.** * :*****.* ********:**.******

AT3G17100.2     RKQSLPVVLEETTDYIAAMEMQIRTMTAIL-------SAVSSSPPPPTPGHEGGQTHMLG
gm042156_Glyma1 RKEPLPVILEEAIDYIPALEMQVRAMQALADLLLGSSSASTSAAAPPS------------
                **:.***:***: ***.*:***:*:* *:        ** :*:..**:
BoxShade v3.31 C (beta, 970507) Output
AT3G17100.2     M E S I S P V S N Q L L Q P T T T S S N S D R S R R K R K K K S - S P S S V E K S P S P S I S L E K W R S E K Q Q Q I Y
gm042156_Glyma1    - - - - - - M S S S L I A N P T A D R S R D S H R T K K K K K S L K Q H Q L Q H E Q S H A - - - - K W K S H A Q Q Q L Y
 
AT3G17100.2     S T K L V H A L R E L R I S Q Q P S S S S S S S I P R G G R A V R E V A D R A L A V A A R G K T L W S R A I L S K A V K
gm042156_Glyma1    S S K L H H A L A R V N I - - - - - - - - S G D A P R R G R A V R E A A D R V L A V A A K G R T R W S R A I L T N R L K
 
AT3G17100.2     L K F R K - - H K R Q R I S N P T T T T L T T G S I R S K K Q R A T V L R L K A K G L P A V Q R K V K V L S R L V P G C
gm042156_Glyma1    L K F R K P I H K R Q K V - - - - - - - - V V G P G R P K K A R F S V L R L K G K T L P A V Q R K V R V L G R L V P G C
 
AT3G17100.2     R K Q S L P V V L E E T T D Y I A A M E M Q I R T M T A I L - - - - - - - S A V S S S P P P P T P G H E G G Q T H M L G
gm042156_Glyma1    R K E P L P V I L E E A I D Y I P A L E M Q V R A M Q A L A D L L L G S S S A S T S A A A P P S - - - - - - - - - - - -
 
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