fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G17100.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm042156 not found in 202aa AT3G17100.2 1st_1st 0.512738853 Ia
Gm019296 not found in 210aa AT3G17100.2 not_1st 0.506369426 II
Gm045884 not found in 214aa AT3G17100.2 not_1st 0.506369426 II
Gm023956 not found in 202aa AT3G06590.2 not_not 0.477707006 III
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G17100.2     M---------ESISPVSNQLLQPTTTSSNSDRSR-RKRKKKSSPSSVEKSPSPSISLEKW
gm042156_Glyma1 ----------MSSSLIAN---------PTADRSRDSHRTKKKKKSLKQHQLQHEQSHAKW
gm019296_Glyma0 MA--------SSSSMISNP-------VPNTDRSRDAKRRKKKAQLRQQQQRQEDQSNPKW
gm045884_Glyma1 MASSPSSSSSSSSSMVSNP-------VPNTDRSRDAKRRKKKAQLR-QQLRQEDQSNPKW
gm023956_Glyma0 ----------MSSSLIAN---------PTADRSRDSHRTKKKKKSIKQHQQQHD---AKW
                           * * ::*         ..:****  :* **.     ::  . .    **

AT3G17100.2     RSEKQQQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWS
gm042156_Glyma1 KSHAQQQLYSSKLHHALARVNISGDA--------PRRGRAVREAADRVLAVAAKGRTRWS
gm019296_Glyma0 KSQAQQQIYSSKLRQALARVNLGLAPP-------PRRGKAVRDAADRVLAVTAKGMTRWS
gm045884_Glyma1 KSQAQQQIYSSKLRQALARVNLGSSAP-------PRRGKAVRDAADRVLAVTAKGRTRWS
gm023956_Glyma0 KTHAQQQLYSSKLHQALARVNISGDA--------PRRGRAVRDAADRVLAVAAKGRTRWS
                ::. ***:**:** :** .:.:.  .        ** *:***:.***.***:*:* * **

AT3G17100.2     RAILSKAVKLKFRK--HKRQRISNPTTTTLTTGSIRS-KKQRATVLRLKAKGLPAVQRKV
gm042156_Glyma1 RAILTNRLKLKFRKPIHKRQK--------VVVGPGRP-KKARFSVLRLKGKTLPAVQRKV
gm019296_Glyma0 RAILTNRLKLKFTK--HKRQR--------LTTPPTRS-KKPRVSVYRLKGKGSPGVQRKV
gm045884_Glyma1 RAILTNRLKLKFTK--HKRQRV------TITTPPTRS-KKPRVSVYRLKGKGSPGVQRKV
gm023956_Glyma0 RAILTNRLKVKFRKPVHKRQKV-------VVVGPGRPKKKARFSVLRLRGKTLPAVQRKV
                ****:: :*:** *  ****:        :.. . *. ** * :* **:.*  *.*****

AT3G17100.2     KVLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAIL----------SAVSSSPPPP
gm042156_Glyma1 RVLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMQALADLLLG--SSSASTSA-AAPP
gm019296_Glyma0 RFLARLVPGCRKEPLPVILEEAIDYIPALEMQVRAMSALFNLLSGSSSSSGAAASPSAPP
gm045884_Glyma1 RFLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMSALFNLLSG-----GGAASTSAPP
gm023956_Glyma0 RVLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMQALADLLLG--SSSASTSATAAPP
                :.*.********:.***:***: ***.*:***:*:* *:           ...:: ..**

AT3G17100.2     TPGHEGGQTHMLG
gm042156_Glyma1 S------------
gm019296_Glyma0 SSS----------
gm045884_Glyma1 SSS----------
gm023956_Glyma0 S------------
                :
BoxShade v3.31 C (beta, 970507) Output
AT3G17100.2     M - - - - - - - - - E S I S P V S N Q L L Q P T T T S S N S D R S R - R K R K K K S S P S S V E K S P S P S I S L E K W
gm042156_Glyma1    - - - - - - - - - - M S S S L I A N - - - - - - - - - P T A D R S R D S H R T K K K K K S L K Q H Q L Q H E Q S H A K W
gm019296_Glyma0    M A - - - - - - - - S S S S M I S N P - - - - - - - V P N T D R S R D A K R R K K K A Q L R Q Q Q Q R Q E D Q S N P K W
gm045884_Glyma1    M A S S P S S S S S S S S S M V S N P - - - - - - - V P N T D R S R D A K R R K K K A Q L R - Q Q L R Q E D Q S N P K W
gm023956_Glyma0    - - - - - - - - - - M S S S L I A N - - - - - - - - - P T A D R S R D S H R T K K K K K S I K Q H Q Q Q H D - - - A K W
 
AT3G17100.2     R S E K Q Q Q I Y S T K L V H A L R E L R I S Q Q P S S S S S S S I P R G G R A V R E V A D R A L A V A A R G K T L W S
gm042156_Glyma1    K S H A Q Q Q L Y S S K L H H A L A R V N I S G D A - - - - - - - - P R R G R A V R E A A D R V L A V A A K G R T R W S
gm019296_Glyma0    K S Q A Q Q Q I Y S S K L R Q A L A R V N L G L A P P - - - - - - - P R R G K A V R D A A D R V L A V T A K G M T R W S
gm045884_Glyma1    K S Q A Q Q Q I Y S S K L R Q A L A R V N L G S S A P - - - - - - - P R R G K A V R D A A D R V L A V T A K G R T R W S
gm023956_Glyma0    K T H A Q Q Q L Y S S K L H Q A L A R V N I S G D A - - - - - - - - P R R G R A V R D A A D R V L A V A A K G R T R W S
 
AT3G17100.2     R A I L S K A V K L K F R K - - H K R Q R I S N P T T T T L T T G S I R S - K K Q R A T V L R L K A K G L P A V Q R K V
gm042156_Glyma1    R A I L T N R L K L K F R K P I H K R Q K - - - - - - - - V V V G P G R P - K K A R F S V L R L K G K T L P A V Q R K V
gm019296_Glyma0    R A I L T N R L K L K F T K - - H K R Q R - - - - - - - - L T T P P T R S - K K P R V S V Y R L K G K G S P G V Q R K V
gm045884_Glyma1    R A I L T N R L K L K F T K - - H K R Q R V - - - - - - T I T T P P T R S - K K P R V S V Y R L K G K G S P G V Q R K V
gm023956_Glyma0    R A I L T N R L K V K F R K P V H K R Q K V - - - - - - - V V V G P G R P K K K A R F S V L R L R G K T L P A V Q R K V
 
AT3G17100.2     K V L S R L V P G C R K Q S L P V V L E E T T D Y I A A M E M Q I R T M T A I L - - - - - - - - - - S A V S S S P P P P
gm042156_Glyma1    R V L G R L V P G C R K E P L P V I L E E A I D Y I P A L E M Q V R A M Q A L A D L L L G - - S S S A S T S A - A A P P
gm019296_Glyma0    R F L A R L V P G C R K E P L P V I L E E A I D Y I P A L E M Q V R A M S A L F N L L S G S S S S S G A A A S P S A P P
gm045884_Glyma1    R F L G R L V P G C R K E P L P V I L E E A I D Y I P A L E M Q V R A M S A L F N L L S G - - - - - G G A A S T S A P P
gm023956_Glyma0    R V L G R L V P G C R K E P L P V I L E E A I D Y I P A L E M Q V R A M Q A L A D L L L G - - S S S A S T S A T A A P P
 
AT3G17100.2     T P G H E G G Q T H M L G
gm042156_Glyma1    S - - - - - - - - - - - -
gm019296_Glyma0    S S S - - - - - - - - - -
gm045884_Glyma1    S S S - - - - - - - - - -
gm023956_Glyma0    S - - - - - - - - - - - -
 
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