fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G17600.1 SESSVNLSLSLTFPST at 27/158 in AT3G17600.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os009627 SLISTDLRLGLTLSSV in 57/205 AT2G46990.1 1st_not 0.514423076 II
Os023743 MELELGLRLALPSPSP in 6/183 AT3G17600.1 not_1st 0.403846153 II
Gm045965 TDLSTDLRLGLSISPS in 119/260 AT3G17600.1 not_1st 0.625 II
Gm045966 TDLSTDLRLGLSISPS in 119/243 AT3G17600.1 not_1st 0.524038461 II
Pt016750 KDLSTDLRLGLSISTS in 37/175 AT3G62100.1 1st_not 0.581730769 II
Sm019334 not found in 130aa AT5G65670.1 1st_not 0.408653846 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G17600.1     ---------------------------MEVS-----------------------------
pt016750_POPTR_ ------------------------------------------------------------
Os023743_Os06t0 --------------ME-----------LELGLRLA-------------------------
gm045965_Glyma1 MSPTLMANQNQRECAECLTWLCFLLITLSLSFFLFCFKVASVVCIYKEPKVAAFLFSLDQ
Os009627_Os02t0 --------------MEC-------------------------------------------
Sm019334_Selmo1 ------------------------------------------------------------
gm045966_Glyma1 MSPTLMANQNQRECAECLTWLCFLLITLSLSFFLFCFKVASVVCIYKEPKVAAFLFSLDQ
                                                                            

AT3G17600.1     -----------------NSCSSFSSSSVDSTK----------PSPSESS-----------
pt016750_POPTR_ ------MG---------RGATSSSSSSFESSNY---------PSVSSKSSLSQ-------
Os023743_Os06t0 ------LPS----PSPSPATATAAGSELDLLNS--------APGSCRKRGFEE---ALGG
gm045965_Glyma1 FHSLEDMGTLEQIDAPQTQSSSSSSSSIDSNNN--PSRTRTPPSSSPSSSLCR-------
Os009627_Os02t0 ------MAS--------TEESLPASSSMDSCSGELPTTTTTAPAQSTASSGCRPPATAAK
Sm019334_Selmo1 ------------------------------------------------------------
gm045966_Glyma1 FHSLEDMGTLEQIDAPQTQSSSSSSSSIDSNNN--PSRTRTPPSSSPSSSLCR-------
                                                                            

AT3G17600.1     --------VNLSLSLT--------FPSTSPQREARQDWPPIKSRLRDTLKGRR------L
pt016750_POPTR_ LKKDLSTDLRLGLSIS---TSQQENPSTPSDQQLS-DWPPIKPFLRKALASEEN----EC
Os023743_Os06t0 FKTDDDNDDGNGRGGDG--DSDGEMGNK---RRKLVGWPPVKCL---------------H
gm045965_Glyma1 NRTDLSTDLRLGLSISP--SSQSESPFNSTRREESFDWPPIKSILRSTLVGKQS----YL
Os009627_Os02t0 RRSLISTDLRLGLTLSSVVHIDGNNPST-----------PRSSLTTATVTADRGGGGGGH
Sm019334_Selmo1 -----------------------------------VGWPPVQSFRKNSLAAPTV----HH
gm045966_Glyma1 NRTDLSTDLRLGLSISP--SSQSESPFNSTRREESFDWPPIKSILRSTLVGKQS----YL
                                                       * .                  

AT3G17600.1     LRRGD-DTSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSI-----------I
pt016750_POPTR_ SS-----ATFFVKVYMEGIPIGRKLNLLAHDGYHDLIQTLDQMFNTSI-----------L
Os023743_Os06t0 RRRDGGCGGGYVKVKMEGLAIGRKLDLSILGSYAELLDTLHLMFPSTN------QE---D
gm045965_Glyma1 SQR----PSLFVKVYMEGIPIGRKLNLMAHYGYDGLVKTLGHMFRTNI-----------L
Os009627_Os02t0 GRR----RSLFVKVYMEGVPIGRKLDLLPLDGYKGLVARLASMFRASITYHHCHRQFAVV
Sm019334_Selmo1 AKPHQAAGSQLVKVYMDGVPIGRKVSLRTHSSYERLSGALEEMFRRFISGNDK------L
gm045966_Glyma1 SQR----PSLFVKVYMEGIPIGRKLNLMAHYGYDGLVKTLGHMFRTNI-----------L
                           *** *:*:.****:.*    .*  *   *  **                

AT3G17600.1     CGNRDRKH------HVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITRPERY-----
pt016750_POPTR_ WPEMDIEHS--GQCHVLTYEDKEGDWLIVGDVPWEMFLPSVRRLKITRADSL-----
Os023743_Os06t0 GHDRRRRHP-----YAVTYEDGEGDWMQVGDVPWEAFAKSVKRLKILV---------
gm045965_Glyma1 CPNSQPLNS--GNFHVLTYEDQEGDWMMVGDVPWEMFLNSVKRLKITRADRC-----
Os009627_Os02t0 GMKTNKVH------HVLTYEDQEGDWMMAGDVPWELFLTSVKRLRIARADDKYCYSC
Sm019334_Selmo1 VSDTKKFNFIYGSDYVLTYEDKDGDLMLVGDVPWEMFVGAVKRLRIMKGSEAIGL--
gm045966_Glyma1 CPNSQPLNS--GNFHVLTYEDQEGDWMMVGDVPWE----------------------
                  .    :      :.:**** :** : .**:**:
BoxShade v3.31 C (beta, 970507) Output
AT3G17600.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - M E V S - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt016750_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os023743_Os06t0    - - - - - - - - - - - - - - M E - - - - - - - - - - - L E L G L R L A - - - - - - - - - - - - - - - - - - - - - - - - -
gm045965_Glyma1    M S P T L M A N Q N Q R E C A E C L T W L C F L L I T L S L S F F L F C F K V A S V V C I Y K E P K V A A F L F S L D Q
Os009627_Os02t0    - - - - - - - - - - - - - - M E C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sm019334_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm045966_Glyma1    M S P T L M A N Q N Q R E C A E C L T W L C F L L I T L S L S F F L F C F K V A S V V C I Y K E P K V A A F L F S L D Q
 
AT3G17600.1     - - - - - - - - - - - - - - - - - N S C S S F S S S S V D S T K - - - - - - - - - - P S P S E S S - - - - - - - - - - -
pt016750_POPTR_    - - - - - - M G - - - - - - - - - R G A T S S S S S S F E S S N Y - - - - - - - - - P S V S S K S S L S Q - - - - - - -
Os023743_Os06t0    - - - - - - L P S - - - - P S P S P A T A T A A G S E L D L L N S - - - - - - - - A P G S C R K R G F E E - - - A L G G
gm045965_Glyma1    F H S L E D M G T L E Q I D A P Q T Q S S S S S S S S I D S N N N - - P S R T R T P P S S S P S S S L C R - - - - - - -
Os009627_Os02t0    - - - - - - M A S - - - - - - - - T E E S L P A S S S M D S C S G E L P T T T T T A P A Q S T A S S G C R P P A T A A K
Sm019334_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm045966_Glyma1    F H S L E D M G T L E Q I D A P Q T Q S S S S S S S S I D S N N N - - P S R T R T P P S S S P S S S L C R - - - - - - -
 
AT3G17600.1     - - - - - - - - V N L S L S L T - - - - - - - - F P S T S P Q R E A R Q D W P P I K S R L R D T L K G R R - - - - - - L
pt016750_POPTR_    L K K D L S T D L R L G L S I S - - - T S Q Q E N P S T P S D Q Q L S - D W P P I K P F L R K A L A S E E N - - - - E C
Os023743_Os06t0    F K T D D D N D D G N G R G G D G - - D S D G E M G N K - - - R R K L V G W P P V K C L - - - - - - - - - - - - - - - H
gm045965_Glyma1    N R T D L S T D L R L G L S I S P - - S S Q S E S P F N S T R R E E S F D W P P I K S I L R S T L V G K Q S - - - - Y L
Os009627_Os02t0    R R S L I S T D L R L G L T L S S V V H I D G N N P S T - - - - - - - - - - - P R S S L T T A T V T A D R G G G G G G H
Sm019334_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V G W P P V Q S F R K N S L A A P T V - - - - H H
gm045966_Glyma1    N R T D L S T D L R L G L S I S P - - S S Q S E S P F N S T R R E E S F D W P P I K S I L R S T L V G K Q S - - - - Y L
 
AT3G17600.1     L R R G D - D T S L F V K V Y M E G V P I G R K L D L C V F S G Y E S L L E N L S H M F D T S I - - - - - - - - - - - I
pt016750_POPTR_    S S - - - - - A T F F V K V Y M E G I P I G R K L N L L A H D G Y H D L I Q T L D Q M F N T S I - - - - - - - - - - - L
Os023743_Os06t0    R R R D G G C G G G Y V K V K M E G L A I G R K L D L S I L G S Y A E L L D T L H L M F P S T N - - - - - - Q E - - - D
gm045965_Glyma1    S Q R - - - - P S L F V K V Y M E G I P I G R K L N L M A H Y G Y D G L V K T L G H M F R T N I - - - - - - - - - - - L
Os009627_Os02t0    G R R - - - - R S L F V K V Y M E G V P I G R K L D L L P L D G Y K G L V A R L A S M F R A S I T Y H H C H R Q F A V V
Sm019334_Selmo1    A K P H Q A A G S Q L V K V Y M D G V P I G R K V S L R T H S S Y E R L S G A L E E M F R R F I S G N D K - - - - - - L
gm045966_Glyma1    S Q R - - - - P S L F V K V Y M E G I P I G R K L N L M A H Y G Y D G L V K T L G H M F R T N I - - - - - - - - - - - L
 
AT3G17600.1     C G N R D R K H - - - - - - H V L T Y E D K D G D W M M V G D I P W D M F L E T V R R L K I T R P E R Y - - - - -
pt016750_POPTR_    W P E M D I E H S - - G Q C H V L T Y E D K E G D W L I V G D V P W E M F L P S V R R L K I T R A D S L - - - - -
Os023743_Os06t0    G H D R R R R H P - - - - - Y A V T Y E D G E G D W M Q V G D V P W E A F A K S V K R L K I L V - - - - - - - - -
gm045965_Glyma1    C P N S Q P L N S - - G N F H V L T Y E D Q E G D W M M V G D V P W E M F L N S V K R L K I T R A D R C - - - - -
Os009627_Os02t0    G M K T N K V H - - - - - - H V L T Y E D Q E G D W M M A G D V P W E L F L T S V K R L R I A R A D D K Y C Y S C
Sm019334_Selmo1    V S D T K K F N F I Y G S D Y V L T Y E D K D G D L M L V G D V P W E M F V G A V K R L R I M K G S E A I G L - -
gm045966_Glyma1    C P N S Q P L N S - - G N F H V L T Y E D Q E G D W M M V G D V P W E - - - - - - - - - - - - - - - - - - - - - -
 
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