fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G17600.1 SESSVNLSLSLTFPST at 27/158 in AT3G17600.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016750 KDLSTDLRLGLSISTS in 37/175 AT3G62100.1 1st_not 0.581730769 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G17600.1     ---MEVSNSCSSFSSSSVDSTKPSPSES------SVNLSLSLTF-------PSTSPQREA
pt016750_POPTR_ MGRGATSSSSSSFESSNYPSVSSKSSLSQLKKDLSTDLRLGLSISTSQQENPST-PSDQQ
                     .*.*.***.**.  *.....* *      *.:* *.*::       *** *. : 

AT3G17600.1     RQDWPPIKSRLRDTLKGRRLLRRGDDTSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLS
pt016750_POPTR_ LSDWPPIKPFLRKALASEE--NECSSATFFVKVYMEGIPIGRKLNLLAHDGYHDLIQTLD
                 .******. **.:* ...  .. ..:::********:******:* ...**..*::.*.

AT3G17600.1     HMFDTSIICGNRDRKH----HVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITRPERY
pt016750_POPTR_ QMFNTSILWPEMDIEHSGQCHVLTYEDKEGDWLIVGDVPWEMFLPSVRRLKITRADSL
                :**:***:  : * :*    ********:***::***:**:*** :********.:
BoxShade v3.31 C (beta, 970507) Output
AT3G17600.1     - - - M E V S N S C S S F S S S S V D S T K P S P S E S - - - - - - S V N L S L S L T F - - - - - - - P S T S P Q R E A
pt016750_POPTR_    M G R G A T S S S S S S F E S S N Y P S V S S K S S L S Q L K K D L S T D L R L G L S I S T S Q Q E N P S T - P S D Q Q
 
AT3G17600.1     R Q D W P P I K S R L R D T L K G R R L L R R G D D T S L F V K V Y M E G V P I G R K L D L C V F S G Y E S L L E N L S
pt016750_POPTR_    L S D W P P I K P F L R K A L A S E E - - N E C S S A T F F V K V Y M E G I P I G R K L N L L A H D G Y H D L I Q T L D
 
AT3G17600.1     H M F D T S I I C G N R D R K H - - - - H V L T Y E D K D G D W M M V G D I P W D M F L E T V R R L K I T R P E R Y
pt016750_POPTR_    Q M F N T S I L W P E M D I E H S G Q C H V L T Y E D K E G D W L I V G D V P W E M F L P S V R R L K I T R A D S L
 
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