fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G17600.1 SESSVNLSLSLTFPST at 27/158 in AT3G17600.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os009627 SLISTDLRLGLTLSSV in 57/205 AT2G46990.1 1st_not 0.514423076 II
Os023743 MELELGLRLALPSPSP in 6/183 AT3G17600.1 not_1st 0.403846153 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G17600.1     ME--VSNSCSSFSSSSVDS--------TKPSPSES------------------------S
Os023743_Os06t0 MELELGLRLALPSPS--------------PSPATATAAGSELDLLNSAPGSCRKR----G
Os009627_Os02t0 MECMASTEESLPASSSMDSCSGELPTTTTTAPAQSTASSG-----CRPPATAAKRRSLIS
                **   .   :  :.*              .:*: :                        .

AT3G17600.1     VNLSLSLTF---------------PSTSPQREARQD---WPPIKSRLRDTLK--------
Os023743_Os06t0 FEEALGGFKTDDDNDDGNGRGGDGDSDGEMGNKRRKLVGWPPVKCL--------------
Os009627_Os02t0 TDLRLGLTLSSVVHIDGN-----NPST--------------PRSSLTTATVTADRGGGGG
                 :  *.                   *               * ..               

AT3G17600.1     --GRRLLRRGDDTSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSI-------
Os023743_Os06t0 --HRR--RDGGCGGGYVKVKMEGLAIGRKLDLSILGSYAELLDTLHLMFPSTNQED----
Os009627_Os02t0 GHGRR-------RSLFVKVYMEGVPIGRKLDLLPLDGYKGLVARLASMFRASITYHHCHR
                   **        . :*** ***:.*******  :..*  *:  *  ** ::        

AT3G17600.1     ---ICGNRDRK-H-HVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITRP-ERY----
Os023743_Os06t0 -----GHDRRRRHPYAVTYEDGEGDWMQVGDVPWEAFAKSVKRLKILV---------
Os009627_Os02t0 QFAVVGMKTNKVH-HVLTYEDQEGDWMMAGDVPWELFLTSVKRLRIARADDKYCYSC
                     *   .: * :.:**** :**** .**:**: *  :*:**:*
BoxShade v3.31 C (beta, 970507) Output
AT3G17600.1     M E - - V S N S C S S F S S S S V D S - - - - - - - - T K P S P S E S - - - - - - - - - - - - - - - - - - - - - - - - S
Os023743_Os06t0    M E L E L G L R L A L P S P S - - - - - - - - - - - - - - P S P A T A T A A G S E L D L L N S A P G S C R K R - - - - G
Os009627_Os02t0    M E C M A S T E E S L P A S S S M D S C S G E L P T T T T T A P A Q S T A S S G - - - - - C R P P A T A A K R R S L I S
 
AT3G17600.1     V N L S L S L T F - - - - - - - - - - - - - - - P S T S P Q R E A R Q D - - - W P P I K S R L R D T L K - - - - - - - -
Os023743_Os06t0    F E E A L G G F K T D D D N D D G N G R G G D G D S D G E M G N K R R K L V G W P P V K C L - - - - - - - - - - - - - -
Os009627_Os02t0    T D L R L G L T L S S V V H I D G N - - - - - N P S T - - - - - - - - - - - - - - P R S S L T T A T V T A D R G G G G G
 
AT3G17600.1     - - G R R L L R R G D D T S L F V K V Y M E G V P I G R K L D L C V F S G Y E S L L E N L S H M F D T S I - - - - - - -
Os023743_Os06t0    - - H R R - - R D G G C G G G Y V K V K M E G L A I G R K L D L S I L G S Y A E L L D T L H L M F P S T N Q E D - - - -
Os009627_Os02t0    G H G R R - - - - - - - R S L F V K V Y M E G V P I G R K L D L L P L D G Y K G L V A R L A S M F R A S I T Y H H C H R
 
AT3G17600.1     - - - I C G N R D R K - H - H V L T Y E D K D G D W M M V G D I P W D M F L E T V R R L K I T R P - E R Y - - - -
Os023743_Os06t0    - - - - - G H D R R R R H P Y A V T Y E D G E G D W M Q V G D V P W E A F A K S V K R L K I L V - - - - - - - - -
Os009627_Os02t0    Q F A V V G M K T N K V H - H V L T Y E D Q E G D W M M A G D V P W E L F L T S V K R L R I A R A D D K Y C Y S C
 
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