fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G17600.1 SESSVNLSLSLTFPST at 27/158 in AT3G17600.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb007705 DDLSTDLQLGLSLSPA in 43/193 AT3G17600.1 1st_1st 0.576923076 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G17600.1     -MEVSNSCSSFSSSSVD-STKPSPSESS---------------VNLSLSL----------
Sb007705_Sorbi1 MAECKDSSGRSPSSSMDSSTHPVLSTTSSGCRPAARRDDLSTDLQLGLSLSPASSSLLVA
                  * .:*..  .***:* **:*  * :*               ::*.***          

AT3G17600.1     ----TFPSTSPQREARQDWPPIKSRLRDTLKGRRLLRRGDDTSLFVKVYMEGVPIGRKLD
Sb007705_Sorbi1 ESKRSIPST-PRNQVLPDWPPIKPFLRSALTASARRR----STLFVKVYMEGVPIGRKLD
                    ::*** *:.:.  ******. **.:*..    *    ::*****************

AT3G17600.1     LCVFSGYESLLENLSHMFDTSIICGN---------RDRKHHVLTYEDKDGDWMMVGDIPW
Sb007705_Sorbi1 LLLLDGYDSLLAKLRHMFKASITYADVMEYHQRAPHEKAAHVLTYEDQDGDWMMVGDVPW
                * ::.**:*** :* ***.:**  .:         :::  *******:*********:**

AT3G17600.1     DMFLETVRRLKITRPERY
Sb007705_Sorbi1 ELFLGSVRKLRIARTDKC
                ::** :**:*:*:*.::
BoxShade v3.31 C (beta, 970507) Output
AT3G17600.1     - M E V S N S C S S F S S S S V D - S T K P S P S E S S - - - - - - - - - - - - - - - V N L S L S L - - - - - - - - - -
Sb007705_Sorbi1    M A E C K D S S G R S P S S S M D S S T H P V L S T T S S G C R P A A R R D D L S T D L Q L G L S L S P A S S S L L V A
 
AT3G17600.1     - - - - T F P S T S P Q R E A R Q D W P P I K S R L R D T L K G R R L L R R G D D T S L F V K V Y M E G V P I G R K L D
Sb007705_Sorbi1    E S K R S I P S T - P R N Q V L P D W P P I K P F L R S A L T A S A R R R - - - - S T L F V K V Y M E G V P I G R K L D
 
AT3G17600.1     L C V F S G Y E S L L E N L S H M F D T S I I C G N - - - - - - - - - R D R K H H V L T Y E D K D G D W M M V G D I P W
Sb007705_Sorbi1    L L L L D G Y D S L L A K L R H M F K A S I T Y A D V M E Y H Q R A P H E K A A H V L T Y E D Q D G D W M M V G D V P W
 
AT3G17600.1     D M F L E T V R R L K I T R P E R Y
Sb007705_Sorbi1    E L F L G S V R K L R I A R T D K C
 
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