fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G17609.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm049225 not found in 326aa AT5G11260.1 not_not 0.421487603 III
Gm022937 not found in 324aa AT5G11260.1 not_not 0.417355371 III
Pt008406 not found in 168aa AT5G11260.1 not_not 0.417355371 III
Pt005713 not found in 169aa AT5G11260.1 not_not 0.404958677 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G17609.2     ------------------------------------------------------------
pt005713_POPTR_ ------------------------------------------------------------
pt008406_POPTR_ ------------------------------------------------------------
gm049225_Glyma1 MERSGGMVTGSHERNELVRVRHGSDSGAKPLKNLNGQICQICGDTIGLTATGDLFVACHE
gm022937_Glyma0 MERSGGMVTGSHERNELVRVRHGSDSRSKPLKNLNGQSCQICGDTIGLTATGDVFVACHE
                                                                            

AT3G17609.2     ----------------MS------------------------------------------
pt005713_POPTR_ ------------------------------------------------------------
pt008406_POPTR_ ------------------------------------------------------------
gm049225_Glyma1 CGFPLCHSCYEYELKNVSQSCPQCKTTFTSRQGGAEVEGDDDDEDDADDLDNGINYGQGN
gm022937_Glyma0 CGFPLCHSCYEYELKHMSQSCPQCKTAFTSHQEGAEVEGDDDDEDDADDLDNEINYGQGN
                                                                            

AT3G17609.2     ---------------------LQRPN---GNS---------SSSSSHKKHKTE-------
pt005713_POPTR_ ------MQEQAA---------SSIP----AYSFPSSSER--SSSSAPQLEVKE-------
pt008406_POPTR_ ------MQEQTT---------SSIP----ANSLPSSSER--SSSSAPQLEVKE-------
gm049225_Glyma1 NSKSGMLWEEDADLSSSSGHDSHIPNPHLVNGQPVSGEFPCATSDAQSMQTTSDPMGQSE
gm022937_Glyma0 SSKAGMLWEEDADLSSSSGHDSQIPNPHLANGQPMSGEFPCATSDAQSMQTTS--IGQSE
                                        *      .         ::*.: . . ..       

AT3G17609.2     ---------------ESDEELLMVPDM--EAAGSTCVLSSSADDGVNNPELDQTQ-NGVS
pt005713_POPTR_ -------------GMESDEEIRRVPEMSGEPAGT----SASGRETGSIAGPGRVQPAGEG
pt008406_POPTR_ -------------GMESDEEIRRVPEMSGEPAGT----SASGRETGSNAGPDRVQPTGEG
gm049225_Glyma1 KVHSLPYADPKQPGPESDEEIRRVPEIGGESAGT----SASRPDAGSNAGTERAQ--GTG
gm022937_Glyma0 KVHSLSYADPKQPGPESDEEIRRVPEIGGESAGT----SASQPDAGSNAGTERVQ--GTG
                               *****:  **::  *.**:    *:*  :  . .   :.*  * .

AT3G17609.2     TAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEKI
pt005713_POPTR_ QSQRKRGRSPADKENKRLKRLLRNRVSAQQARERKKAYLTELETRVKDLEKKNSELEEKL
pt008406_POPTR_ QSQRKRGRSPADKENKRLKRLLRNRVSAQQARERKKAYLTELETRVKDLEKKNSELEERL
gm049225_Glyma1 DSQKKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLIDLETRVKDLEKKNSELKERL
gm022937_Glyma0 EGQKKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLIDLETRVKDLEKKNSELKERL
                 .:::***.*.*** : *******************.*: :**:*.::*:::*.:*:*::

AT3G17609.2     STLTNENTMLRKMLINTRPKTDDNH----------
pt005713_POPTR_ STLQNENQMLRHILKNTTASRRGGSNSA-NADGSS
pt008406_POPTR_ STLQNENQMLRQILKNTTASRKGGSSGT-NADGS-
gm049225_Glyma1 STLQNENQMLRQVLKNTTASRRGSNSGTNNAE---
gm022937_Glyma0 STLQNENQMLRQILKNTTASRRGSNNGTNNAE---
                *** *** ***::* ** ..  ..
BoxShade v3.31 C (beta, 970507) Output
AT3G17609.2     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt005713_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt008406_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm049225_Glyma1    M E R S G G M V T G S H E R N E L V R V R H G S D S G A K P L K N L N G Q I C Q I C G D T I G L T A T G D L F V A C H E
gm022937_Glyma0    M E R S G G M V T G S H E R N E L V R V R H G S D S R S K P L K N L N G Q S C Q I C G D T I G L T A T G D V F V A C H E
 
AT3G17609.2     - - - - - - - - - - - - - - - - M S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt005713_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt008406_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm049225_Glyma1    C G F P L C H S C Y E Y E L K N V S Q S C P Q C K T T F T S R Q G G A E V E G D D D D E D D A D D L D N G I N Y G Q G N
gm022937_Glyma0    C G F P L C H S C Y E Y E L K H M S Q S C P Q C K T A F T S H Q E G A E V E G D D D D E D D A D D L D N E I N Y G Q G N
 
AT3G17609.2     - - - - - - - - - - - - - - - - - - - - - L Q R P N - - - G N S - - - - - - - - - S S S S S H K K H K T E - - - - - - -
pt005713_POPTR_    - - - - - - M Q E Q A A - - - - - - - - - S S I P - - - - A Y S F P S S S E R - - S S S S A P Q L E V K E - - - - - - -
pt008406_POPTR_    - - - - - - M Q E Q T T - - - - - - - - - S S I P - - - - A N S L P S S S E R - - S S S S A P Q L E V K E - - - - - - -
gm049225_Glyma1    N S K S G M L W E E D A D L S S S S G H D S H I P N P H L V N G Q P V S G E F P C A T S D A Q S M Q T T S D P M G Q S E
gm022937_Glyma0    S S K A G M L W E E D A D L S S S S G H D S Q I P N P H L A N G Q P M S G E F P C A T S D A Q S M Q T T S - - I G Q S E
 
AT3G17609.2     - - - - - - - - - - - - - - - E S D E E L L M V P D M - - E A A G S T C V L S S S A D D G V N N P E L D Q T Q - N G V S
pt005713_POPTR_    - - - - - - - - - - - - - G M E S D E E I R R V P E M S G E P A G T - - - - S A S G R E T G S I A G P G R V Q P A G E G
pt008406_POPTR_    - - - - - - - - - - - - - G M E S D E E I R R V P E M S G E P A G T - - - - S A S G R E T G S N A G P D R V Q P T G E G
gm049225_Glyma1    K V H S L P Y A D P K Q P G P E S D E E I R R V P E I G G E S A G T - - - - S A S R P D A G S N A G T E R A Q - - G T G
gm022937_Glyma0    K V H S L S Y A D P K Q P G P E S D E E I R R V P E I G G E S A G T - - - - S A S Q P D A G S N A G T E R V Q - - G T G
 
AT3G17609.2     T A K R R R G R N P V D K E Y R S L K R L L R N R V S A Q Q A R E R K K V Y V S D L E S R A N E L Q N N N D Q L E E K I
pt005713_POPTR_    Q S Q R K R G R S P A D K E N K R L K R L L R N R V S A Q Q A R E R K K A Y L T E L E T R V K D L E K K N S E L E E K L
pt008406_POPTR_    Q S Q R K R G R S P A D K E N K R L K R L L R N R V S A Q Q A R E R K K A Y L T E L E T R V K D L E K K N S E L E E R L
gm049225_Glyma1    D S Q K K R G R S P A D K E S K R L K R L L R N R V S A Q Q A R E R K K A Y L I D L E T R V K D L E K K N S E L K E R L
gm022937_Glyma0    E G Q K K R G R S P A D K E S K R L K R L L R N R V S A Q Q A R E R K K A Y L I D L E T R V K D L E K K N S E L K E R L
 
AT3G17609.2     S T L T N E N T M L R K M L I N T R P K T D D N H - - - - - - - - - -
pt005713_POPTR_    S T L Q N E N Q M L R H I L K N T T A S R R G G S N S A - N A D G S S
pt008406_POPTR_    S T L Q N E N Q M L R Q I L K N T T A S R K G G S S G T - N A D G S -
gm049225_Glyma1    S T L Q N E N Q M L R Q V L K N T T A S R R G S N S G T N N A E - - -
gm022937_Glyma0    S T L Q N E N Q M L R Q I L K N T T A S R R G S N N G T N N A E - - -
 
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