fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G17609.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm044303 not found in 191aa AT3G17609.2 1st_1st 0.533057851 Ia
Pt033482 not found in 218aa AT3G17609.2 1st_1st 0.570247933 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G17609.2     MSLQRPN-G-----------------------------------NSSSSS----------
gm044303_Glyma1 MSLPRPSEGKAPSQLK-------------------EGVAPAAAAASSSSSWNNRLHTFPP
pt033482_POPTR_ MDIGESN-NKYPHDHKKQLLDDDDDDDDDDDDHQVEGTS-ATATSSSSSSWRIRRSTGST
                *.: ... .                                    *****          

AT3G17609.2     -----SHKKHKT---EESDEELLMVPDME----------AAGSTCVLSSSADDGVNNPEL
gm044303_Glyma1 ---LSLHNKSSKI--EDSDEDMFTVPDVETTP----VSVHSAATLQNSNLTQRNVTDP--
pt033482_POPTR_ SDNLISHHKNKLVDHEDSDEDLFTVPDVEARPPAEAAAAAAGNNTTTYNNKNINSNNPEV
                      *:* .    *:***::: ***:*           :. .    .  : . .:*  

AT3G17609.2     DQTQNGVSTA----KRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANE
gm044303_Glyma1 -QFQTGFPG-----KRRRGRNPADKEHRRLKRLLRNRVSAQQARERKKVYVNDLESRAKE
pt033482_POPTR_ -QSAAAAPAATGSNKRHRGRNPVDKEYRRLKRLLRNRVSAQQARERKKVYVNDLESRAKE
                 *   . .      **:*****.***:* **********************.******:*

AT3G17609.2     LQNNNDQLEEKISTLTNENTMLRKMLINTRPKTDDNH----------
gm044303_Glyma1 LQDKNAILEERISTLINENTMLRKVLMNARPKTDDSIEQKQDQLSKS
pt033482_POPTR_ LQEINTKLEEKISTLTNENTMLRKVLMNTRPKVDESMEQKQ------
                **: *  ***:**** ********:*:*:***.*:.
BoxShade v3.31 C (beta, 970507) Output
AT3G17609.2     M S L Q R P N - G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N S S S S S - - - - - - - - - -
gm044303_Glyma1    M S L P R P S E G K A P S Q L K - - - - - - - - - - - - - - - - - - - E G V A P A A A A A S S S S S W N N R L H T F P P
pt033482_POPTR_    M D I G E S N - N K Y P H D H K K Q L L D D D D D D D D D D D D H Q V E G T S - A T A T S S S S S S W R I R R S T G S T
 
AT3G17609.2     - - - - - S H K K H K T - - - E E S D E E L L M V P D M E - - - - - - - - - - A A G S T C V L S S S A D D G V N N P E L
gm044303_Glyma1    - - - L S L H N K S S K I - - E D S D E D M F T V P D V E T T P - - - - V S V H S A A T L Q N S N L T Q R N V T D P - -
pt033482_POPTR_    S D N L I S H H K N K L V D H E D S D E D L F T V P D V E A R P P A E A A A A A A G N N T T T Y N N K N I N S N N P E V
 
AT3G17609.2     D Q T Q N G V S T A - - - - K R R R G R N P V D K E Y R S L K R L L R N R V S A Q Q A R E R K K V Y V S D L E S R A N E
gm044303_Glyma1    - Q F Q T G F P G - - - - - K R R R G R N P A D K E H R R L K R L L R N R V S A Q Q A R E R K K V Y V N D L E S R A K E
pt033482_POPTR_    - Q S A A A A P A A T G S N K R H R G R N P V D K E Y R R L K R L L R N R V S A Q Q A R E R K K V Y V N D L E S R A K E
 
AT3G17609.2     L Q N N N D Q L E E K I S T L T N E N T M L R K M L I N T R P K T D D N H - - - - - - - - - -
gm044303_Glyma1    L Q D K N A I L E E R I S T L I N E N T M L R K V L M N A R P K T D D S I E Q K Q D Q L S K S
pt033482_POPTR_    L Q E I N T K L E E K I S T L T N E N T M L R K V L M N T R P K V D E S M E Q K Q - - - - - -
 
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