fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G17609.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt008406 not found in 168aa AT5G11260.1 not_not 0.417355371 III
Pt005713 not found in 169aa AT5G11260.1 not_not 0.404958677 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G17609.2     MSLQR---------PNGNSSSSSSHKKHKTE---ESDEELLMVPDM--EAAGSTCVLSSS
pt005713_POPTR_ MQEQAASSIPAYSFPSSSERSSSSAPQLEVKEGMESDEEIRRVPEMSGEPAGT----SAS
pt008406_POPTR_ MQEQTTSSIPANSLPSSSERSSSSAPQLEVKEGMESDEEIRRVPEMSGEPAGT----SAS
                *. *          *.... ****  : :.:   *****:  **:*  *.**:    *:*

AT3G17609.2     ADDGVNNPELDQTQ-NGVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSD
pt005713_POPTR_ GRETGSIAGPGRVQPAGEGQSQRKRGRSPADKENKRLKRLLRNRVSAQQARERKKAYLTE
pt008406_POPTR_ GRETGSNAGPDRVQPTGEGQSQRKRGRSPADKENKRLKRLLRNRVSAQQARERKKAYLTE
                . :  . .  .:.*  * . ::*:***.*.*** : *******************.*:::

AT3G17609.2     LESRANELQNNNDQLEEKISTLTNENTMLRKMLINTRPKTDDNH---------
pt005713_POPTR_ LETRVKDLEKKNSELEEKLSTLQNENQMLRHILKNTTASRRGGSNSANADGSS
pt008406_POPTR_ LETRVKDLEKKNSELEERLSTLQNENQMLRQILKNTTASRKGGSSGTNADGS-
                **:*.::*:::*.:***::*** *** ***::* ** ..  ..
BoxShade v3.31 C (beta, 970507) Output
AT3G17609.2     M S L Q R - - - - - - - - - P N G N S S S S S S H K K H K T E - - - E S D E E L L M V P D M - - E A A G S T C V L S S S
pt005713_POPTR_    M Q E Q A A S S I P A Y S F P S S S E R S S S S A P Q L E V K E G M E S D E E I R R V P E M S G E P A G T - - - - S A S
pt008406_POPTR_    M Q E Q T T S S I P A N S L P S S S E R S S S S A P Q L E V K E G M E S D E E I R R V P E M S G E P A G T - - - - S A S
 
AT3G17609.2     A D D G V N N P E L D Q T Q - N G V S T A K R R R G R N P V D K E Y R S L K R L L R N R V S A Q Q A R E R K K V Y V S D
pt005713_POPTR_    G R E T G S I A G P G R V Q P A G E G Q S Q R K R G R S P A D K E N K R L K R L L R N R V S A Q Q A R E R K K A Y L T E
pt008406_POPTR_    G R E T G S N A G P D R V Q P T G E G Q S Q R K R G R S P A D K E N K R L K R L L R N R V S A Q Q A R E R K K A Y L T E
 
AT3G17609.2     L E S R A N E L Q N N N D Q L E E K I S T L T N E N T M L R K M L I N T R P K T D D N H - - - - - - - - -
pt005713_POPTR_    L E T R V K D L E K K N S E L E E K L S T L Q N E N Q M L R H I L K N T T A S R R G G S N S A N A D G S S
pt008406_POPTR_    L E T R V K D L E K K N S E L E E R L S T L Q N E N Q M L R Q I L K N T T A S R K G G S S G T N A D G S -
 
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