fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G17609.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt033482 not found in 218aa AT3G17609.2 1st_1st 0.570247933 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G17609.2     MSLQRPNG----------------------------------NSSSSS------------
pt033482_POPTR_ MDIGESNNKYPHDHKKQLLDDDDDDDDDDDDHQVEGTSATATSSSSSSWRIRRSTGSTSD
                *.: ..*.                                  .*****            

AT3G17609.2     ---SHKKHKT---EESDEELLMVPDME----------AAGSTCVLSSSADDGVNNPELDQ
pt033482_POPTR_ NLISHHKNKLVDHEDSDEDLFTVPDVEARPPAEAAAAAAGNNTTTYNNKNINSNNPEV-Q
                   **:*:*    *:***:*: ***:*          ***.. .  .. : . ****: *

AT3G17609.2     TQNGVSTA----KRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQ
pt033482_POPTR_ SAAAAPAATGSNKRHRGRNPVDKEYRRLKRLLRNRVSAQQARERKKVYVNDLESRAKELQ
                :  ...:*    **:*********** **********************.******:***

AT3G17609.2     NNNDQLEEKISTLTNENTMLRKMLINTRPKTDDNH----
pt033482_POPTR_ EINTKLEEKISTLTNENTMLRKVLMNTRPKVDESMEQKQ
                : * :*****************:*:*****.*:.
BoxShade v3.31 C (beta, 970507) Output
AT3G17609.2     M S L Q R P N G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N S S S S S - - - - - - - - - - - -
pt033482_POPTR_    M D I G E S N N K Y P H D H K K Q L L D D D D D D D D D D D D H Q V E G T S A T A T S S S S S S W R I R R S T G S T S D
 
AT3G17609.2     - - - S H K K H K T - - - E E S D E E L L M V P D M E - - - - - - - - - - A A G S T C V L S S S A D D G V N N P E L D Q
pt033482_POPTR_    N L I S H H K N K L V D H E D S D E D L F T V P D V E A R P P A E A A A A A A G N N T T T Y N N K N I N S N N P E V - Q
 
AT3G17609.2     T Q N G V S T A - - - - K R R R G R N P V D K E Y R S L K R L L R N R V S A Q Q A R E R K K V Y V S D L E S R A N E L Q
pt033482_POPTR_    S A A A A P A A T G S N K R H R G R N P V D K E Y R R L K R L L R N R V S A Q Q A R E R K K V Y V N D L E S R A K E L Q
 
AT3G17609.2     N N N D Q L E E K I S T L T N E N T M L R K M L I N T R P K T D D N H - - - -
pt033482_POPTR_    E I N T K L E E K I S T L T N E N T M L R K V L M N T R P K V D E S M E Q K Q
 
0