fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G17609.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt033482 not found in 218aa AT3G17609.2 1st_1st 0.570247933 Ia
Pt008406 not found in 168aa AT5G11260.1 not_not 0.417355371 III
Pt005713 not found in 169aa AT5G11260.1 not_not 0.404958677 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G17609.2     MSLQRPNG----------------------------------NSSSSS------------
pt033482_POPTR_ MDIGESNNKYPHDHKKQLLDDDDDDDDDDDDHQVEGTSATATSSSSSSWRIRRSTGSTSD
pt005713_POPTR_ MQEQAASS-------------------------IPAYSFPSSSERSSS------------
pt008406_POPTR_ MQEQTTSS-------------------------IPANSLPSSSERSSS------------
                *.   ...                                  .. ***            

AT3G17609.2     ---SHKKHKT---EESDEELLMVPDME----------AAGSTCVLSSSADDGVNNPELDQ
pt033482_POPTR_ NLISHHKNKLVDHEDSDEDLFTVPDVEARPPAEAAAAAAGNNTTTYNNKNINSNNPEV-Q
pt005713_POPTR_ ---SAPQLEVKEGMESDEEIRRVPEMSGEP---AGTSASGRETG-------SIAGPGRVQ
pt008406_POPTR_ ---SAPQLEVKEGMESDEEIRRVPEMSGEP---AGTSASGRETG-------SNAGPDRVQ
                   *  : :     :***::  **::.          *:*           .  .*   *

AT3G17609.2     TQNGVSTA----KRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQ
pt033482_POPTR_ SAAAAPAATGSNKRHRGRNPVDKEYRRLKRLLRNRVSAQQARERKKVYVNDLESRAKELQ
pt005713_POPTR_ -----PAGEGQSQRKRGRSPADKENKRLKRLLRNRVSAQQARERKKAYLTELETRVKDLE
pt008406_POPTR_ -----PTGEGQSQRKRGRSPADKENKRLKRLLRNRVSAQQARERKKAYLTELETRVKDLE
                     .:.    :*:***.*.*** : *******************.*:.:**:*.::*:

AT3G17609.2     NNNDQLEEKISTLTNENTMLRKMLINTRP---------KTDDNH----
pt033482_POPTR_ EINTKLEEKISTLTNENTMLRKVLMNTRP---------KVDESMEQKQ
pt005713_POPTR_ KKNSELEEKLSTLQNENQMLRHILKNTTASRRGGSNSANADGSS----
pt008406_POPTR_ KKNSELEERLSTLQNENQMLRQILKNTTASRKGGSSGTNADGS-----
                : * :***::*** *** ***::* ** .         :.* .
BoxShade v3.31 C (beta, 970507) Output
AT3G17609.2     M S L Q R P N G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N S S S S S - - - - - - - - - - - -
pt033482_POPTR_    M D I G E S N N K Y P H D H K K Q L L D D D D D D D D D D D D H Q V E G T S A T A T S S S S S S W R I R R S T G S T S D
pt005713_POPTR_    M Q E Q A A S S - - - - - - - - - - - - - - - - - - - - - - - - - I P A Y S F P S S S E R S S S - - - - - - - - - - - -
pt008406_POPTR_    M Q E Q T T S S - - - - - - - - - - - - - - - - - - - - - - - - - I P A N S L P S S S E R S S S - - - - - - - - - - - -
 
AT3G17609.2     - - - S H K K H K T - - - E E S D E E L L M V P D M E - - - - - - - - - - A A G S T C V L S S S A D D G V N N P E L D Q
pt033482_POPTR_    N L I S H H K N K L V D H E D S D E D L F T V P D V E A R P P A E A A A A A A G N N T T T Y N N K N I N S N N P E V - Q
pt005713_POPTR_    - - - S A P Q L E V K E G M E S D E E I R R V P E M S G E P - - - A G T S A S G R E T G - - - - - - - S I A G P G R V Q
pt008406_POPTR_    - - - S A P Q L E V K E G M E S D E E I R R V P E M S G E P - - - A G T S A S G R E T G - - - - - - - S N A G P D R V Q
 
AT3G17609.2     T Q N G V S T A - - - - K R R R G R N P V D K E Y R S L K R L L R N R V S A Q Q A R E R K K V Y V S D L E S R A N E L Q
pt033482_POPTR_    S A A A A P A A T G S N K R H R G R N P V D K E Y R R L K R L L R N R V S A Q Q A R E R K K V Y V N D L E S R A K E L Q
pt005713_POPTR_    - - - - - P A G E G Q S Q R K R G R S P A D K E N K R L K R L L R N R V S A Q Q A R E R K K A Y L T E L E T R V K D L E
pt008406_POPTR_    - - - - - P T G E G Q S Q R K R G R S P A D K E N K R L K R L L R N R V S A Q Q A R E R K K A Y L T E L E T R V K D L E
 
AT3G17609.2     N N N D Q L E E K I S T L T N E N T M L R K M L I N T R P - - - - - - - - - K T D D N H - - - -
pt033482_POPTR_    E I N T K L E E K I S T L T N E N T M L R K V L M N T R P - - - - - - - - - K V D E S M E Q K Q
pt005713_POPTR_    K K N S E L E E K L S T L Q N E N Q M L R H I L K N T T A S R R G G S N S A N A D G S S - - - -
pt008406_POPTR_    K K N S E L E E R L S T L Q N E N Q M L R Q I L K N T T A S R K G G S S G T N A D G S - - - - -
 
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