fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G17609.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os006916 not found in 199aa AT5G11260.1 1st_not 0.400826446 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G17609.2     ----------------------------------MSLQ----RPNGNSSSSSSHKKH---
Os006916_Os02t0 MLHASSKDERRGQSGEAEAEASGGVHANPSSPARMQEQATSSRPSSSERSSSSGGHHMEI
                                                  *. *    **.... ****  :*   

AT3G17609.2     -KTEESDEELLMVPD--MEAAGSTCVLSSSADDGVNNPELDQTQNGVSTAKRRRGRNPVD
Os006916_Os02t0 KEGMESDEEIGRVPELGLEPGGAS-TSGRAAGGGGGGAERAQSSTAQASA-RRRGRSPAD
                 :  *****:  **:  :*..*:: . . :*..* ...*  *:... ::* *****.*.*

AT3G17609.2     KEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEKISTLTNENTMLRK
Os006916_Os02t0 KEHKRLKRLLRNRVSAQQARERKKAYLNDLEVKVKDLEKKNSELEERFSTLQNENQMLRQ
                **:: *******************.*:.*** :.::*:::*.:***::*** *** ***:

AT3G17609.2     MLINTR-----PKTDDNH---
Os006916_Os02t0 ILKNTTVSRRGPGSTASGEGQ
                :* **      * :  .
BoxShade v3.31 C (beta, 970507) Output
AT3G17609.2     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S L Q - - - - R P N G N S S S S S S H K K H - - -
Os006916_Os02t0    M L H A S S K D E R R G Q S G E A E A E A S G G V H A N P S S P A R M Q E Q A T S S R P S S S E R S S S S G G H H M E I
 
AT3G17609.2     - K T E E S D E E L L M V P D - - M E A A G S T C V L S S S A D D G V N N P E L D Q T Q N G V S T A K R R R G R N P V D
Os006916_Os02t0    K E G M E S D E E I G R V P E L G L E P G G A S - T S G R A A G G G G G G A E R A Q S S T A Q A S A - R R R G R S P A D
 
AT3G17609.2     K E Y R S L K R L L R N R V S A Q Q A R E R K K V Y V S D L E S R A N E L Q N N N D Q L E E K I S T L T N E N T M L R K
Os006916_Os02t0    K E H K R L K R L L R N R V S A Q Q A R E R K K A Y L N D L E V K V K D L E K K N S E L E E R F S T L Q N E N Q M L R Q
 
AT3G17609.2     M L I N T R - - - - - P K T D D N H - - -
Os006916_Os02t0    I L K N T T V S R R G P G S T A S G E G Q
 
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