fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G17609.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm044303 not found in 191aa AT3G17609.2 1st_1st 0.533057851 Ia
Gm006504 not found in 191aa AT3G17609.2 not_1st 0.528925619 II
Gm049225 not found in 326aa AT5G11260.1 not_not 0.421487603 III
Gm022937 not found in 324aa AT5G11260.1 not_not 0.417355371 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G17609.2     ------------------------------------------------------------
gm006504_Glyma0 ------------------------------------------------------------
gm044303_Glyma1 ------------------------------------------------------------
gm022937_Glyma0 MERSGGMVTGSHERNELVRVRHGSDSRSKPLKNLNGQSCQICGDTIGLTATGDVFVACHE
gm049225_Glyma1 MERSGGMVTGSHERNELVRVRHGSDSGAKPLKNLNGQICQICGDTIGLTATGDLFVACHE
                                                                            

AT3G17609.2     ----------------MSLQRPN-------------------------------------
gm006504_Glyma0 ----------------MSLPRPSEGKAPSQLKEGVA------------------------
gm044303_Glyma1 ----------------MSLPRPSEGKAPSQLKEGVA------------------------
gm022937_Glyma0 CGFPLCHSCYEYELKHMSQSCPQCKTAFTSHQEGAEVEGDDDDEDDADDLDNEINYGQGN
gm049225_Glyma1 CGFPLCHSCYEYELKNVSQSCPQCKTTFTSRQGGAEVEGDDDDEDDADDLDNGINYGQGN
                                :*   *.                                     

AT3G17609.2     -----------GNSSSSSS-----------------------------------------
gm006504_Glyma0 --------PAAAEASTSSSWNNRL------------NTFP--------------------
gm044303_Glyma1 --------PAAAAASSSSSWNNRL------------HTFP--------------------
gm022937_Glyma0 SSKAGMLWEEDADLSSSSGHDSQIPNPHLANGQPMSGEFPCATSDAQSMQTTS--IGQSE
gm049225_Glyma1 NSKSGMLWEEDADLSSSSGHDSHIPNPHLVNGQPVSGEFPCATSDAQSMQTTSDPMGQSE
                           .  *:**.                                         

AT3G17609.2     --------HKKHKTEESDEELLMVPDMEA------AGSTCVLSSSADDGVNNPELDQTQN
gm006504_Glyma0 ---PLSLHNKNSKIEDSDEDMFTVPDVEATPINVHSAVTLQNSNLNQRNVTDP---QFQS
gm044303_Glyma1 ---PLSLHNKSSKIEDSDEDMFTVPDVETTPVSVHSAATLQNSNLTQRNVTDP---QFQT
gm022937_Glyma0 KVHSLSYADPKQPGPESDEEIRRVPEI--------GGESAGTSASQPDAGSNAGTERVQ-
gm049225_Glyma1 KVHSLPYADPKQPGPESDEEIRRVPEI--------GGESAGTSASRPDAGSNAGTERAQ-
                        . .    :***::  **::        .. :   *       .:.   : * 

AT3G17609.2     GVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLE
gm006504_Glyma0 GFP-GKRRRGRNPADKEHRRLKRLLRNRVSAQQARERKKVYVNDLESRAKEMQDKNAILE
gm044303_Glyma1 GFP-GKRRRGRNPADKEHRRLKRLLRNRVSAQQARERKKVYVNDLESRAKELQDKNAILE
gm022937_Glyma0 GTGEGQKKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLIDLETRVKDLEKKNSELK
gm049225_Glyma1 GTGDSQKKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLIDLETRVKDLEKKNSELK
                *   .:::***.*.*** : *******************.*: ***:*.::::.:*  *:

AT3G17609.2     EKISTLTNENTMLRKMLINT---RPKTDDNH----------
gm006504_Glyma0 ERISTLINENTMLRKVLMNA---RPKNDDSIEQKQDQLSKS
gm044303_Glyma1 ERISTLINENTMLRKVLMNA---RPKTDDSIEQKQDQLSKS
gm022937_Glyma0 ERLSTLQNENQMLRQILKNTTASRRGSNNGTNNAE------
gm049225_Glyma1 ERLSTLQNENQMLRQVLKNTTASRRGSNSGTNNAE------
                *::*** *** ***::* *:   *  .:..
BoxShade v3.31 C (beta, 970507) Output
AT3G17609.2     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm006504_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm044303_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm022937_Glyma0    M E R S G G M V T G S H E R N E L V R V R H G S D S R S K P L K N L N G Q S C Q I C G D T I G L T A T G D V F V A C H E
gm049225_Glyma1    M E R S G G M V T G S H E R N E L V R V R H G S D S G A K P L K N L N G Q I C Q I C G D T I G L T A T G D L F V A C H E
 
AT3G17609.2     - - - - - - - - - - - - - - - - M S L Q R P N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm006504_Glyma0    - - - - - - - - - - - - - - - - M S L P R P S E G K A P S Q L K E G V A - - - - - - - - - - - - - - - - - - - - - - - -
gm044303_Glyma1    - - - - - - - - - - - - - - - - M S L P R P S E G K A P S Q L K E G V A - - - - - - - - - - - - - - - - - - - - - - - -
gm022937_Glyma0    C G F P L C H S C Y E Y E L K H M S Q S C P Q C K T A F T S H Q E G A E V E G D D D D E D D A D D L D N E I N Y G Q G N
gm049225_Glyma1    C G F P L C H S C Y E Y E L K N V S Q S C P Q C K T T F T S R Q G G A E V E G D D D D E D D A D D L D N G I N Y G Q G N
 
AT3G17609.2     - - - - - - - - - - - G N S S S S S S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm006504_Glyma0    - - - - - - - - P A A A E A S T S S S W N N R L - - - - - - - - - - - - N T F P - - - - - - - - - - - - - - - - - - - -
gm044303_Glyma1    - - - - - - - - P A A A A A S S S S S W N N R L - - - - - - - - - - - - H T F P - - - - - - - - - - - - - - - - - - - -
gm022937_Glyma0    S S K A G M L W E E D A D L S S S S G H D S Q I P N P H L A N G Q P M S G E F P C A T S D A Q S M Q T T S - - I G Q S E
gm049225_Glyma1    N S K S G M L W E E D A D L S S S S G H D S H I P N P H L V N G Q P V S G E F P C A T S D A Q S M Q T T S D P M G Q S E
 
AT3G17609.2     - - - - - - - - H K K H K T E E S D E E L L M V P D M E A - - - - - - A G S T C V L S S S A D D G V N N P E L D Q T Q N
gm006504_Glyma0    - - - P L S L H N K N S K I E D S D E D M F T V P D V E A T P I N V H S A V T L Q N S N L N Q R N V T D P - - - Q F Q S
gm044303_Glyma1    - - - P L S L H N K S S K I E D S D E D M F T V P D V E T T P V S V H S A A T L Q N S N L T Q R N V T D P - - - Q F Q T
gm022937_Glyma0    K V H S L S Y A D P K Q P G P E S D E E I R R V P E I - - - - - - - - G G E S A G T S A S Q P D A G S N A G T E R V Q -
gm049225_Glyma1    K V H S L P Y A D P K Q P G P E S D E E I R R V P E I - - - - - - - - G G E S A G T S A S R P D A G S N A G T E R A Q -
 
AT3G17609.2     G V S T A K R R R G R N P V D K E Y R S L K R L L R N R V S A Q Q A R E R K K V Y V S D L E S R A N E L Q N N N D Q L E
gm006504_Glyma0    G F P - G K R R R G R N P A D K E H R R L K R L L R N R V S A Q Q A R E R K K V Y V N D L E S R A K E M Q D K N A I L E
gm044303_Glyma1    G F P - G K R R R G R N P A D K E H R R L K R L L R N R V S A Q Q A R E R K K V Y V N D L E S R A K E L Q D K N A I L E
gm022937_Glyma0    G T G E G Q K K R G R S P A D K E S K R L K R L L R N R V S A Q Q A R E R K K A Y L I D L E T R V K D L E K K N S E L K
gm049225_Glyma1    G T G D S Q K K R G R S P A D K E S K R L K R L L R N R V S A Q Q A R E R K K A Y L I D L E T R V K D L E K K N S E L K
 
AT3G17609.2     E K I S T L T N E N T M L R K M L I N T - - - R P K T D D N H - - - - - - - - - -
gm006504_Glyma0    E R I S T L I N E N T M L R K V L M N A - - - R P K N D D S I E Q K Q D Q L S K S
gm044303_Glyma1    E R I S T L I N E N T M L R K V L M N A - - - R P K T D D S I E Q K Q D Q L S K S
gm022937_Glyma0    E R L S T L Q N E N Q M L R Q I L K N T T A S R R G S N N G T N N A E - - - - - -
gm049225_Glyma1    E R L S T L Q N E N Q M L R Q V L K N T T A S R R G S N S G T N N A E - - - - - -
 
0