fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G17730.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023690 not found in 332aa AT3G17730.1 not_1st 0.628514056 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G17730.1     -----------------------------MAPVGLPPGFRFHPTDEELVNYYLKRKINGQ
Sb023690_Sorbi1 EHSGRQQKGKTKGKDRERSARKEAASWEAMAPADLPPGFRFHPTDEELVNYYLKRKVHGL
                                             ***..**********************::* 

AT3G17730.1     EIELDIIPEVDLYKCEPWDLAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRGGYWKS
Sb023690_Sorbi1 SIELDIIPEVDLYKCEPWELAEKSFLPSRDSEWYFFGPRDRKYPNGCRTNRATQAGYWKS
                .*****************:***********.*************** ******:.*****

AT3G17730.1     TGKDRRVTSQSRAIGMKKTLVYYKGRAPQGIRTDWVMHEYRLDDKDCDDPSSLQDSYALC
Sb023690_Sorbi1 TGKDRRINYQNRSIGMKKTLVYYKGRAPQGLRTNWVMHEYRIEESECENTMGIQDSYALC
                ******:. *.*:*****************:**:*******:::.:*::. .:*******

AT3G17730.1     RVFKKNGICSELESERQLQTGQCSFTTASMEEINSNNNNNYNNDYETMSPEVGVSSACVE
Sb023690_Sorbi1 RVFKKNVALGEFQKQKQ---GECSSSQA-----------NEKQEQFTSVRDAGQSSGSNE
                ******   .*::.::*   *:** : *           * :::  *   :.* **.. *

AT3G17730.1     EVVDDKDDSWMQFITDDAWDTSSNGAAMGHGQGVY
Sb023690_Sorbi1 H---GKDNTWMQFIADDLWCNKTK-----------
                .   .**::*****:** * ..::
BoxShade v3.31 C (beta, 970507) Output
AT3G17730.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A P V G L P P G F R F H P T D E E L V N Y Y L K R K I N G Q
Sb023690_Sorbi1    E H S G R Q Q K G K T K G K D R E R S A R K E A A S W E A M A P A D L P P G F R F H P T D E E L V N Y Y L K R K V H G L
 
AT3G17730.1     E I E L D I I P E V D L Y K C E P W D L A E K S F L P S R D P E W Y F F G P R D R K Y P N G F R T N R A T R G G Y W K S
Sb023690_Sorbi1    S I E L D I I P E V D L Y K C E P W E L A E K S F L P S R D S E W Y F F G P R D R K Y P N G C R T N R A T Q A G Y W K S
 
AT3G17730.1     T G K D R R V T S Q S R A I G M K K T L V Y Y K G R A P Q G I R T D W V M H E Y R L D D K D C D D P S S L Q D S Y A L C
Sb023690_Sorbi1    T G K D R R I N Y Q N R S I G M K K T L V Y Y K G R A P Q G L R T N W V M H E Y R I E E S E C E N T M G I Q D S Y A L C
 
AT3G17730.1     R V F K K N G I C S E L E S E R Q L Q T G Q C S F T T A S M E E I N S N N N N N Y N N D Y E T M S P E V G V S S A C V E
Sb023690_Sorbi1    R V F K K N V A L G E F Q K Q K Q - - - G E C S S S Q A - - - - - - - - - - - N E K Q E Q F T S V R D A G Q S S G S N E
 
AT3G17730.1     E V V D D K D D S W M Q F I T D D A W D T S S N G A A M G H G Q G V Y
Sb023690_Sorbi1    H - - - G K D N T W M Q F I A D D L W C N K T K - - - - - - - - - - -
 
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