fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G17730.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb006365 not found in 261aa AT3G17730.1 1st_1st 0.666666666 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G17730.1     MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWDLAEKSFLPSR
Sb006365_Sorbi1 MAPVGLPPGFRFHPTDEELVNYYLKRKIHGLKIELDIIPEVDLYKCEPWELADKSFLPSR
                ****************************:* :*****************:**:*******

AT3G17730.1     DPEWYFFGPRDRKYPNGFRTNRATRGGYWKSTGKDRRVTSQS-RAIGMKKTLVYYKGRAP
Sb006365_Sorbi1 DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVLHHAGRPIGMKKTLVYYRGRAP
                *************************.************  :: *.**********:****

AT3G17730.1     QGIRTDWVMHEYRLDDKDCDDPSSLQ----------------DSYALCRVFKKNGICSEL
Sb006365_Sorbi1 QGVRTDWVMHEYRLDDKDAEDTLPIQISRHDLHGLCIDHVHEDTYALCRVFKKNAICTEV
                **:***************.:*. .:*                *:**********.**:*:

AT3G17730.1     ESERQLQTGQCS-----------FTTASMEEINSNNNNNYNNDYETMSPEVGVSSACVEE
Sb006365_Sorbi1 DG---LQ-AQCSMALLEGACQQLLTSASQE-------------YQTPSPDVPVGSTSGGA
                :.   ** .***           :*:** *             *:* **:* *.*:.   

AT3G17730.1     VVD-DKDDSWMQFITDDAWDTSSNGAAMGHGQGVY---
Sb006365_Sorbi1 DDDADKDESWMQFISDDAWCSSTADGAEESTSCVALAS
                  * ***:******:**** :*: ..*    . *
BoxShade v3.31 C (beta, 970507) Output
AT3G17730.1     M A P V G L P P G F R F H P T D E E L V N Y Y L K R K I N G Q E I E L D I I P E V D L Y K C E P W D L A E K S F L P S R
Sb006365_Sorbi1    M A P V G L P P G F R F H P T D E E L V N Y Y L K R K I H G L K I E L D I I P E V D L Y K C E P W E L A D K S F L P S R
 
AT3G17730.1     D P E W Y F F G P R D R K Y P N G F R T N R A T R G G Y W K S T G K D R R V T S Q S - R A I G M K K T L V Y Y K G R A P
Sb006365_Sorbi1    D P E W Y F F G P R D R K Y P N G F R T N R A T R A G Y W K S T G K D R R V L H H A G R P I G M K K T L V Y Y R G R A P
 
AT3G17730.1     Q G I R T D W V M H E Y R L D D K D C D D P S S L Q - - - - - - - - - - - - - - - - D S Y A L C R V F K K N G I C S E L
Sb006365_Sorbi1    Q G V R T D W V M H E Y R L D D K D A E D T L P I Q I S R H D L H G L C I D H V H E D T Y A L C R V F K K N A I C T E V
 
AT3G17730.1     E S E R Q L Q T G Q C S - - - - - - - - - - - F T T A S M E E I N S N N N N N Y N N D Y E T M S P E V G V S S A C V E E
Sb006365_Sorbi1    D G - - - L Q - A Q C S M A L L E G A C Q Q L L T S A S Q E - - - - - - - - - - - - - Y Q T P S P D V P V G S T S G G A
 
AT3G17730.1     V V D - D K D D S W M Q F I T D D A W D T S S N G A A M G H G Q G V Y - - -
Sb006365_Sorbi1    D D D A D K D E S W M Q F I S D D A W C S S T A D G A E E S T S C V A L A S
 
0