fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G17860.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm025172 not found in 386aa AT3G17860.1 1st_1st 0.281055900 Ib
Pt024200 not found in 391aa AT3G17860.1 1st_1st 0.343167701 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G17860.1     MERDFLGLGSKNSPITVKEETSES-SRDS-APNRGMNWSFSNKVSASSSQFLSFRPTQED
pt024200_POPTR_ MERDFLGLGTINNPLTIKEATTDTPNKDSAMRGSGMQWSFSNKVSA-IPQFLSFKSSLED
gm025172_Glyma0 MEREFFGLSSKNGAWTTMKDDAVNKSRDQ-VRSSGMQWSFPNKVSA-LPQFLSFKTNQED
                ***:*:**.: *.. *  :  : . .:*.   . **:***.*****  .*****:.. **

AT3G17860.1     RHRKSGNYHLPHSGSFMPSSVADVYDSTRKA-----------------------------
pt024200_POPTR_ KPRKAVHDPVASSSGLMSISTADAFDSNQKTYSGLVQKNMAIDKQ-AGNHYPVTTYGTQQ
gm025172_Glyma0 KPRKTILEPLA-SSGYMAMSTQYAFDSNQKSFLGLTNRNLSISKHAAGNKQGMTVYPLQC
                : **:    :. *.. *. *.  .:**.:*:                             

AT3G17860.1     --PYS--SVQGVRMFPNSNQHEETNAVSMSMPGFQSHHYAPGGRSFMNNNNNSQPLVGVP
pt024200_POPTR_ FDAYSVNRPQDTRMFSISGQQNQTITVSMSSPILQS-HFPPTGHNMLSNSIVPKPLGGVP
gm025172_Glyma0 CDAQS----EEARIFSVSNQSNQV------SPVLQS-NLASTGLNMVNSVIKPQPFGSKS
                  . *    : .*:*. *.* ::.       * :** : .. * .::..   .:*: . .

AT3G17860.1     IMAPPISILPPPGSIVGTTDIRSSSKPIGSPAQLTIFYAGSVCVYDDISPEKAKAIMLLA
pt024200_POPTR_ VIT-PTSALPTLSSIIGTTDLRDGTKSSGAPAQLTIFYAGSVCVYDDVSPEKAQAIMFLA
gm025172_Glyma0 SGT-PLSILPSIGSIVGSTDLRNNSKSSTMPTQLTIFYAGSVCVYDDISPEKAKAIMLMA
                  : * * **. .**:*:**:*..:*.   *:***************:*****:***::*

AT3G17860.1     GNG---------------SSMPQVFSPPQTHQQVVHHTRASVDSSAMPPSFMPTISYLSP
pt024200_POPTR_ GNGGSSGTPNKPISTP--QAQAPIRRPPVSDIFAGNKSN-----TTAPISCIPSPISVT-
gm025172_Glyma0 GNG---YTPTEKMELPTVKLQPAISIPSKDDGFMISQS--------YPPSTFPTPLPLTS
                ***               .  . :  *.  .     ::         * * :*:   :: 

AT3G17860.1     EA-------GSSTNGLGATKATRGLTSTYHNNQANGSNINCPV--PVSCSTNVMAPTVAL
pt024200_POPTR_ ---------SSNTNDLATVKPVVSLASSV-KQTEPPKPLNSP-----GPTSATLVPAVAV
gm025172_Glyma0 HVNSQPGGGSSSNKEISIIRQVGP-------STAPTNHLESPIIGSIGSASKEKAQPVCL
                         .*..: :.  : .         .    . ::.*     . ::   . .*.:

AT3G17860.1     PLARKASLARFLEKRKERVTSVSPYCLDKKSSTDCRRSMSECISSSLSSAT--------
pt024200_POPTR_ PQARKASLARFLEKRKERVTQTSPY-NVSKRSPESGSHGCDGASLSMNFSSSYPLPASN
gm025172_Glyma0 PQARKASLARFLEKRKGRMMRTSPYLYMSKKSPECSSSGSDSVSFSLNFSGSCSLPATN
                * ************** *:  .***   .* *.:.    .:  * *:. :
BoxShade v3.31 C (beta, 970507) Output
AT3G17860.1     M E R D F L G L G S K N S P I T V K E E T S E S - S R D S - A P N R G M N W S F S N K V S A S S S Q F L S F R P T Q E D
pt024200_POPTR_    M E R D F L G L G T I N N P L T I K E A T T D T P N K D S A M R G S G M Q W S F S N K V S A - I P Q F L S F K S S L E D
gm025172_Glyma0    M E R E F F G L S S K N G A W T T M K D D A V N K S R D Q - V R S S G M Q W S F P N K V S A - L P Q F L S F K T N Q E D
 
AT3G17860.1     R H R K S G N Y H L P H S G S F M P S S V A D V Y D S T R K A - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt024200_POPTR_    K P R K A V H D P V A S S S G L M S I S T A D A F D S N Q K T Y S G L V Q K N M A I D K Q - A G N H Y P V T T Y G T Q Q
gm025172_Glyma0    K P R K T I L E P L A - S S G Y M A M S T Q Y A F D S N Q K S F L G L T N R N L S I S K H A A G N K Q G M T V Y P L Q C
 
AT3G17860.1     - - P Y S - - S V Q G V R M F P N S N Q H E E T N A V S M S M P G F Q S H H Y A P G G R S F M N N N N N S Q P L V G V P
pt024200_POPTR_    F D A Y S V N R P Q D T R M F S I S G Q Q N Q T I T V S M S S P I L Q S - H F P P T G H N M L S N S I V P K P L G G V P
gm025172_Glyma0    C D A Q S - - - - E E A R I F S V S N Q S N Q V - - - - - - S P V L Q S - N L A S T G L N M V N S V I K P Q P F G S K S
 
AT3G17860.1     I M A P P I S I L P P P G S I V G T T D I R S S S K P I G S P A Q L T I F Y A G S V C V Y D D I S P E K A K A I M L L A
pt024200_POPTR_    V I T - P T S A L P T L S S I I G T T D L R D G T K S S G A P A Q L T I F Y A G S V C V Y D D V S P E K A Q A I M F L A
gm025172_Glyma0    S G T - P L S I L P S I G S I V G S T D L R N N S K S S T M P T Q L T I F Y A G S V C V Y D D I S P E K A K A I M L M A
 
AT3G17860.1     G N G - - - - - - - - - - - - - - - S S M P Q V F S P P Q T H Q Q V V H H T R A S V D S S A M P P S F M P T I S Y L S P
pt024200_POPTR_    G N G G S S G T P N K P I S T P - - Q A Q A P I R R P P V S D I F A G N K S N - - - - - T T A P I S C I P S P I S V T -
gm025172_Glyma0    G N G - - - Y T P T E K M E L P T V K L Q P A I S I P S K D D G F M I S Q S - - - - - - - - Y P P S T F P T P L P L T S
 
AT3G17860.1     E A - - - - - - - G S S T N G L G A T K A T R G L T S T Y H N N Q A N G S N I N C P V - - P V S C S T N V M A P T V A L
pt024200_POPTR_    - - - - - - - - - S S N T N D L A T V K P V V S L A S S V - K Q T E P P K P L N S P - - - - - G P T S A T L V P A V A V
gm025172_Glyma0    H V N S Q P G G G S S S N K E I S I I R Q V G P - - - - - - - S T A P T N H L E S P I I G S I G S A S K E K A Q P V C L
 
AT3G17860.1     P L A R K A S L A R F L E K R K E R V T S V S P Y C L D K K S S T D C R R S M S E C I S S S L S S A T - - - - - - - -
pt024200_POPTR_    P Q A R K A S L A R F L E K R K E R V T Q T S P Y - N V S K R S P E S G S H G C D G A S L S M N F S S S Y P L P A S N
gm025172_Glyma0    P Q A R K A S L A R F L E K R K G R M M R T S P Y L Y M S K K S P E C S S S G S D S V S F S L N F S G S C S L P A T N
 
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