fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G17860.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt024200 not found in 391aa AT3G17860.1 1st_1st 0.343167701 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G17860.1     MERDFLGLGSKNSPITVKEETSES-SRDSA-PNRGMNWSFSNKVSASSSQFLSFRPTQED
pt024200_POPTR_ MERDFLGLGTINNPLTIKEATTDTPNKDSAMRGSGMQWSFSNKVSA-IPQFLSFKSSLED
                *********: *.*:*:** *::: .:***  . **:*********  .*****:.: **

AT3G17860.1     RHRKSGNYHLPHSGSFMPSSVADVYDSTRKAPYSSV------------------------
pt024200_POPTR_ KPRKAVHDPVASSSGLMSISTADAFDSNQKT-YSGLVQKNMAIDKQAGNHYPVTTYGTQQ
                : **: :  :. *..:*. *.**.:**.:*: **.:                        

AT3G17860.1     ---------QGVRMFPNSNQHEETNAVSMSMPGFQSHHYAPGGRSFMNNNNNSQPLVGVP
pt024200_POPTR_ FDAYSVNRPQDTRMFSISGQQNQTITVSMSSPILQS-HFPPTGHNMLSNSIVPKPLGGVP
                         *..***. *.*:::* :**** * :** *:.* *:.::.*.  .:** ***

AT3G17860.1     IMAPPISILPPPGSIVGTTDIRSSSKPIGSPAQLTIFYAGSVCVYDDISPEKAKAIMLLA
pt024200_POPTR_ VIT-PTSALPTLSSIIGTTDLRDGTKSSGAPAQLTIFYAGSVCVYDDVSPEKAQAIMFLA
                ::: * * **. .**:****:*..:*. *:*****************:*****:***:**

AT3G17860.1     GNGSSMPQVFSPPQTHQQVVHHTRASV--------DSSAMPPSFMPT-ISYLSPEAGSST
pt024200_POPTR_ GNGGSSGTPNKPISTPQAQAPIRRPPVSDIFAGNKSNTTAPISCIPSPISVTS----SNT
                ***.*     .* .* *  .   *..*        ..:: * * :*: **  *    *.*

AT3G17860.1     NGLGATKATRGLTSTYHNNQANGSNINCPVPVSCSTNVMAPTVALPLARKASLARFLEKR
pt024200_POPTR_ NDLATVKPVVSLASSVKQTEPP-KPLNSPGPTSAT---LVPAVAVPQARKASLARFLEKR
                *.*.:.*.. .*:*: ::.:.  . :*.* *.*.:   :.*:**:* *************

AT3G17860.1     KERVTSVSPYCLDKKS----STDCR-RSMSECISSS--LSSAT
pt024200_POPTR_ KERVTQTSPYNVSKRSPESGSHGCDGASLSMNFSSSYPLPASN
                *****..*** :.*:*    * .*   *:*  :***  *.::.
BoxShade v3.31 C (beta, 970507) Output
AT3G17860.1     M E R D F L G L G S K N S P I T V K E E T S E S - S R D S A - P N R G M N W S F S N K V S A S S S Q F L S F R P T Q E D
pt024200_POPTR_    M E R D F L G L G T I N N P L T I K E A T T D T P N K D S A M R G S G M Q W S F S N K V S A - I P Q F L S F K S S L E D
 
AT3G17860.1     R H R K S G N Y H L P H S G S F M P S S V A D V Y D S T R K A P Y S S V - - - - - - - - - - - - - - - - - - - - - - - -
pt024200_POPTR_    K P R K A V H D P V A S S S G L M S I S T A D A F D S N Q K T - Y S G L V Q K N M A I D K Q A G N H Y P V T T Y G T Q Q
 
AT3G17860.1     - - - - - - - - - Q G V R M F P N S N Q H E E T N A V S M S M P G F Q S H H Y A P G G R S F M N N N N N S Q P L V G V P
pt024200_POPTR_    F D A Y S V N R P Q D T R M F S I S G Q Q N Q T I T V S M S S P I L Q S - H F P P T G H N M L S N S I V P K P L G G V P
 
AT3G17860.1     I M A P P I S I L P P P G S I V G T T D I R S S S K P I G S P A Q L T I F Y A G S V C V Y D D I S P E K A K A I M L L A
pt024200_POPTR_    V I T - P T S A L P T L S S I I G T T D L R D G T K S S G A P A Q L T I F Y A G S V C V Y D D V S P E K A Q A I M F L A
 
AT3G17860.1     G N G S S M P Q V F S P P Q T H Q Q V V H H T R A S V - - - - - - - - D S S A M P P S F M P T - I S Y L S P E A G S S T
pt024200_POPTR_    G N G G S S G T P N K P I S T P Q A Q A P I R R P P V S D I F A G N K S N T T A P I S C I P S P I S V T S - - - - S N T
 
AT3G17860.1     N G L G A T K A T R G L T S T Y H N N Q A N G S N I N C P V P V S C S T N V M A P T V A L P L A R K A S L A R F L E K R
pt024200_POPTR_    N D L A T V K P V V S L A S S V K Q T E P P - K P L N S P G P T S A T - - - L V P A V A V P Q A R K A S L A R F L E K R
 
AT3G17860.1     K E R V T S V S P Y C L D K K S - - - - S T D C R - R S M S E C I S S S - - L S S A T
pt024200_POPTR_    K E R V T Q T S P Y N V S K R S P E S G S H G C D G A S L S M N F S S S Y P L P A S N
 
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