fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G17860.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm025172 not found in 386aa AT3G17860.1 1st_1st 0.281055900 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G17860.1     MERDFLGLGSKNSP-ITVKEETSESSRDSAPNRGMNWSFSNKVSASSSQFLSFRPTQEDR
gm025172_Glyma0 MEREFFGLSSKNGAWTTMKDDAVNKSRDQVRSSGMQWSFPNKVSA-LPQFLSFKTNQEDK
                ***:*:**.***..  *:*::: :.***.. . **:***.*****  .*****:..***:

AT3G17860.1     HRKSGNYHLPHSGSFMPSSVADVYDSTRKA--------------PYSSVQGVRMFP---N
gm025172_Glyma0 PRKTILEPLASSG-YMAMSTQYAFDSNQKSFLGLTNRNLSISKHAAGNKQGMTVYPLQCC
                 **:    *. ** :*. *.  .:**.:*:              . .. **: ::*    

AT3G17860.1     SNQHEETNAVSMS------MPGFQSHHYAPGGRSFMNNNNNSQPLVGVPIMAPPISILPP
gm025172_Glyma0 DAQSEEARIFSVSNQSNQVSPVLQS-NLASTGLNMVNSVIKPQPF-GSKSSGTPLSILPS
                . * **:. .*:*       * :** : *. * .::*.  :.**: *    ..*:****.

AT3G17860.1     PGSIVGTTDIRSSSKPIGSPAQLTIFYAGSVCVYDDISPEKAKAIMLLAGNGSSMPQVFS
gm025172_Glyma0 IGSIVGSTDLRNNSKSSTMPTQLTIFYAGSVCVYDDISPEKAKAIMLMAGNGYTPTEKME
                 *****:**:*..**.   *:**************************:**** : .: :.

AT3G17860.1     PPQTHQQVVHHTRASVD----SSAMPPSFMPTISYLSPEAGSSTNGLGATKATRGLTSTY
gm025172_Glyma0 LPTVKLQPAISIPSKDDGFMISQSYPPSTFPTPLPLTSHVNSQPGGGSSSNKEISIIRQV
                 * .: * .    :. *    *.: *** :**   *:....*...* .:::   .:    

AT3G17860.1     HNNQANGSNINCPV--PVSCSTNVMAPTVALPLARKASLARFLEKRKERVTSVSPYCLDK
gm025172_Glyma0 GPSTAPTNHLESPIIGSIGSASKEKAQPVCLPQARKASLARFLEKRKGRMMRTSPYLYMS
                  . *  .:::.*:  .:..:::  * .*.** ************** *:  .***   .

AT3G17860.1     KSSTDCRRSMSECISSSLS-------SAT-
gm025172_Glyma0 KKSPECSSSGSDSVSFSLNFSGSCSLPATN
                *.*.:*  * *:.:* **.       .**
BoxShade v3.31 C (beta, 970507) Output
AT3G17860.1     M E R D F L G L G S K N S P - I T V K E E T S E S S R D S A P N R G M N W S F S N K V S A S S S Q F L S F R P T Q E D R
gm025172_Glyma0    M E R E F F G L S S K N G A W T T M K D D A V N K S R D Q V R S S G M Q W S F P N K V S A - L P Q F L S F K T N Q E D K
 
AT3G17860.1     H R K S G N Y H L P H S G S F M P S S V A D V Y D S T R K A - - - - - - - - - - - - - - P Y S S V Q G V R M F P - - - N
gm025172_Glyma0    P R K T I L E P L A S S G - Y M A M S T Q Y A F D S N Q K S F L G L T N R N L S I S K H A A G N K Q G M T V Y P L Q C C
 
AT3G17860.1     S N Q H E E T N A V S M S - - - - - - M P G F Q S H H Y A P G G R S F M N N N N N S Q P L V G V P I M A P P I S I L P P
gm025172_Glyma0    D A Q S E E A R I F S V S N Q S N Q V S P V L Q S - N L A S T G L N M V N S V I K P Q P F - G S K S S G T P L S I L P S
 
AT3G17860.1     P G S I V G T T D I R S S S K P I G S P A Q L T I F Y A G S V C V Y D D I S P E K A K A I M L L A G N G S S M P Q V F S
gm025172_Glyma0    I G S I V G S T D L R N N S K S S T M P T Q L T I F Y A G S V C V Y D D I S P E K A K A I M L M A G N G Y T P T E K M E
 
AT3G17860.1     P P Q T H Q Q V V H H T R A S V D - - - - S S A M P P S F M P T I S Y L S P E A G S S T N G L G A T K A T R G L T S T Y
gm025172_Glyma0    L P T V K L Q P A I S I P S K D D G F M I S Q S Y P P S T F P T P L P L T S H V N S Q P G G G S S S N K E I S I I R Q V
 
AT3G17860.1     H N N Q A N G S N I N C P V - - P V S C S T N V M A P T V A L P L A R K A S L A R F L E K R K E R V T S V S P Y C L D K
gm025172_Glyma0    G P S T A P T N H L E S P I I G S I G S A S K E K A Q P V C L P Q A R K A S L A R F L E K R K G R M M R T S P Y L Y M S
 
AT3G17860.1     K S S T D C R R S M S E C I S S S L S - - - - - - - S A T -
gm025172_Glyma0    K K S P E C S S S G S D S V S F S L N F S G S C S L P A T N
 
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