fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G18010.1 DHQEQTLELFPLRKEG at 314/350 in AT3G18010.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt027776 TGESQTLQLFPLRSGG in 334/386 AT3G18010.1 1st_1st 0.293510324 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G18010.1     MWTMGYNEGG----ADSFNGGRKLRPLIPR----LTSCPTAAV---------NT-----N
pt027776_POPTR_ MWMMGYNDGGEFNISDSFN-GRKLRPLVPRPIPSTNNTPTASSPPCLGSRLHNTDFFALN
                ** ****:**    :**** *******:**     .. ***:          **     *

AT3G18010.1     SDH-------RFNMAVVTMTAEQNKRELMMLNSEPQHPPVMVSSRWNPTPDQLRVLEELY
pt027776_POPTR_ QYHLGMHLSFLFSLSLSSM-ADQNKRE---FNTQ----PVVMSSRWNPTPEQLRTLEDLY
                . *        *.::: :* *:*****   :*::    **::********:***.**:**

AT3G18010.1     RQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMET----GHEET
pt027776_POPTR_ RRGTRTPSTDQIQDITAQLRRYGRIEGKNVFYWFQNHKARERQKRRRQMESDSFDGH---
                *:******:*:**:*********:**************************:    **   

AT3G18010.1     VLSTASLVSNHG---FDKKDP----PGYKVEQVKNWICSVGCDTQPE-------------
pt027776_POPTR_ ------LQNGHGIEIFERKESEASRTGYEGEQTKNWAPSTNCSTLSEESVSISRATKGAM
                      * ..**   *::*:.    .**: **.***  *..*.* .*             

AT3G18010.1     ----KPSRDYHLEEPANIRVEHNARCGGDERRSFLGINTTWQMMQLPPSFYSSSHHHHQR
pt027776_POPTR_ AEYCRPDGWMQLDEG---ELQH--------RRNFIERNATWEMMQL-----SCPSPTHQR
                    :*.   :*:*    .::*        **.*:  *:**:****     *..   ***

AT3G18010.1     NLILNSPTVSSNMSNSNNA----VSASKDTVTVSPVFLRTREATN--------TETCHRN
pt027776_POPTR_ NTI-SSTSSTTTMSKQGAAAAKLIKAHDLNVFIAPY----RENGHHGALINQFNSSVIND
                * * .*.: ::.**:.. *    :.* . .* ::*     **  :        ..:  .:

AT3G18010.1     GDDNKDQEQHEDCSNGELDHQEQTLELFPLRKEGFCSDGEKDKNISGIH-----------
pt027776_POPTR_ GDESRG-------GTGE----SQTLQLFPLR-----SGGDGNNNIESINERESEVSVSAA
                **:.:.       ..**    .***:*****     *.*: ::**..*:           

AT3G18010.1     ----------C-FYEFLPLKN
pt027776_POPTR_ EALNANNFAPCQFFEFLPLKH
                          * *:******:
BoxShade v3.31 C (beta, 970507) Output
AT3G18010.1     M W T M G Y N E G G - - - - A D S F N G G R K L R P L I P R - - - - L T S C P T A A V - - - - - - - - - N T - - - - - N
pt027776_POPTR_    M W M M G Y N D G G E F N I S D S F N - G R K L R P L V P R P I P S T N N T P T A S S P P C L G S R L H N T D F F A L N
 
AT3G18010.1     S D H - - - - - - - R F N M A V V T M T A E Q N K R E L M M L N S E P Q H P P V M V S S R W N P T P D Q L R V L E E L Y
pt027776_POPTR_    Q Y H L G M H L S F L F S L S L S S M - A D Q N K R E - - - F N T Q - - - - P V V M S S R W N P T P E Q L R T L E D L Y
 
AT3G18010.1     R Q G T R T P S A D H I Q Q I T A Q L R R Y G K I E G K N V F Y W F Q N H K A R E R Q K R R R Q M E T - - - - G H E E T
pt027776_POPTR_    R R G T R T P S T D Q I Q D I T A Q L R R Y G R I E G K N V F Y W F Q N H K A R E R Q K R R R Q M E S D S F D G H - - -
 
AT3G18010.1     V L S T A S L V S N H G - - - F D K K D P - - - - P G Y K V E Q V K N W I C S V G C D T Q P E - - - - - - - - - - - - -
pt027776_POPTR_    - - - - - - L Q N G H G I E I F E R K E S E A S R T G Y E G E Q T K N W A P S T N C S T L S E E S V S I S R A T K G A M
 
AT3G18010.1     - - - - K P S R D Y H L E E P A N I R V E H N A R C G G D E R R S F L G I N T T W Q M M Q L P P S F Y S S S H H H H Q R
pt027776_POPTR_    A E Y C R P D G W M Q L D E G - - - E L Q H - - - - - - - - R R N F I E R N A T W E M M Q L - - - - - S C P S P T H Q R
 
AT3G18010.1     N L I L N S P T V S S N M S N S N N A - - - - V S A S K D T V T V S P V F L R T R E A T N - - - - - - - - T E T C H R N
pt027776_POPTR_    N T I - S S T S S T T T M S K Q G A A A A K L I K A H D L N V F I A P Y - - - - R E N G H H G A L I N Q F N S S V I N D
 
AT3G18010.1     G D D N K D Q E Q H E D C S N G E L D H Q E Q T L E L F P L R K E G F C S D G E K D K N I S G I H - - - - - - - - - - -
pt027776_POPTR_    G D E S R G - - - - - - - G T G E - - - - S Q T L Q L F P L R - - - - - S G G D G N N N I E S I N E R E S E V S V S A A
 
AT3G18010.1     - - - - - - - - - - C - F Y E F L P L K N
pt027776_POPTR_    E A L N A N N F A P C Q F F E F L P L K H
 
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