fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G18400.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp028835 not found in 424aa AT5G53950.1 1st_not 0.410084033 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G18400.1     -----------------MEENLPPGFRFHPTDEELITHYLCRKVSDIGFTGKAVVDVDLN
pp028835_Pp1s28 MAAPWHQEPQGKDQSQRVESFLPPGFRFHPTDEELVSYYLTKKVLDSRFAVRAIAEVDLN
                                 :*. **************:::** :** *  *: :*:.:****

AT3G18400.1     KCEPWDLPAKASMGEKEWYFFSQRDRKYPTGLRTNRATEAGYWKTTGKDKEIYRSG--VL
pp028835_Pp1s28 KCEPWDLPEKAKMGEKEWYFFSLRDRKYPTGMRTNRATDAGYWKATGKDRDVLAHGRPRL
                ******** **.********** ********:******:*****:****:::   *   *

AT3G18400.1     VGMKKTLVFYKGRAPKGEKSNWVMHEYRLESK--QPFNP-TNKEEWVVCRVFEKSTAAKK
pp028835_Pp1s28 IGMKKTLVFYMGRAPKGEKTNWIMHEYRLENDGGHPLSPRANKDEWVVCRIFEKSSGGKR
                :********* ********:**:*******..  :*:.* :**:******:****:..*:

AT3G18400.1     A--------------QEQQPQSSQPSF---GSP------------CDA-----NSSMANE
pp028835_Pp1s28 GFSMSESHMRQGMAYQLEDARSSLPPLMDNESPNPTVIDERTATNCETFVETEQMSCYNR
                .              * ::.:** *.:    **            *::     : *  *.

AT3G18400.1     FEDIDELPNLNSNSSTID-----------------YNNHIHQYSQRNVYSEDNTTST--A
pp028835_Pp1s28 VQDFDHKKEMNCVMSWINVQPAGMDMVPQVGGLSSLDNGLPKPYPGNEICEKSMSLSRQA
                .:*:*.  ::*.  * *:                  :* : :    *  .*.. : :  *

AT3G18400.1     GLNMNMNMASTNLQSWT---TSLLGPPLSPINSLLLKAFQIRNSYSFPKEMIPSFNHSSL
pp028835_Pp1s28 GFNQQALMQSANMTTTTGFRVTSLRPKTEPL------------SFSEGED-----EAQST
                *:* :  * *:*: : *   .: * *  .*:            *:*  ::     : .* 

AT3G18400.1     QQGV-----------SNMIQN----ASSSSQVQPQ-------------------------
pp028835_Pp1s28 QKGCDYVNWPADLAGASLYQNDGTEGDSSSPLQSSTGGTDLSCLTGSLCSGENMSFDFKY
                *:*            :.: **    ..*** :*..                         

AT3G18400.1     -------PQEEAFNMDSI-W-
pp028835_Pp1s28 RLQDITAPVDSGHGPEIIGWA
                       * :.... : * *
BoxShade v3.31 C (beta, 970507) Output
AT3G18400.1     - - - - - - - - - - - - - - - - - M E E N L P P G F R F H P T D E E L I T H Y L C R K V S D I G F T G K A V V D V D L N
pp028835_Pp1s28    M A A P W H Q E P Q G K D Q S Q R V E S F L P P G F R F H P T D E E L V S Y Y L T K K V L D S R F A V R A I A E V D L N
 
AT3G18400.1     K C E P W D L P A K A S M G E K E W Y F F S Q R D R K Y P T G L R T N R A T E A G Y W K T T G K D K E I Y R S G - - V L
pp028835_Pp1s28    K C E P W D L P E K A K M G E K E W Y F F S L R D R K Y P T G M R T N R A T D A G Y W K A T G K D R D V L A H G R P R L
 
AT3G18400.1     V G M K K T L V F Y K G R A P K G E K S N W V M H E Y R L E S K - - Q P F N P - T N K E E W V V C R V F E K S T A A K K
pp028835_Pp1s28    I G M K K T L V F Y M G R A P K G E K T N W I M H E Y R L E N D G G H P L S P R A N K D E W V V C R I F E K S S G G K R
 
AT3G18400.1     A - - - - - - - - - - - - - - Q E Q Q P Q S S Q P S F - - - G S P - - - - - - - - - - - - C D A - - - - - N S S M A N E
pp028835_Pp1s28    G F S M S E S H M R Q G M A Y Q L E D A R S S L P P L M D N E S P N P T V I D E R T A T N C E T F V E T E Q M S C Y N R
 
AT3G18400.1     F E D I D E L P N L N S N S S T I D - - - - - - - - - - - - - - - - - Y N N H I H Q Y S Q R N V Y S E D N T T S T - - A
pp028835_Pp1s28    V Q D F D H K K E M N C V M S W I N V Q P A G M D M V P Q V G G L S S L D N G L P K P Y P G N E I C E K S M S L S R Q A
 
AT3G18400.1     G L N M N M N M A S T N L Q S W T - - - T S L L G P P L S P I N S L L L K A F Q I R N S Y S F P K E M I P S F N H S S L
pp028835_Pp1s28    G F N Q Q A L M Q S A N M T T T T G F R V T S L R P K T E P L - - - - - - - - - - - - S F S E G E D - - - - - E A Q S T
 
AT3G18400.1     Q Q G V - - - - - - - - - - - S N M I Q N - - - - A S S S S Q V Q P Q - - - - - - - - - - - - - - - - - - - - - - - - -
pp028835_Pp1s28    Q K G C D Y V N W P A D L A G A S L Y Q N D G T E G D S S S P L Q S S T G G T D L S C L T G S L C S G E N M S F D F K Y
 
AT3G18400.1     - - - - - - - P Q E E A F N M D S I - W -
pp028835_Pp1s28    R L Q D I T A P V D S G H G P E I I G W A
 
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