fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G18400.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp028835 not found in 424aa AT5G53950.1 1st_not 0.410084033 II
Pp029701 not found in 425aa AT5G61430.1 not_not 0.410084033 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G18400.1     -----------------MEENLPPGFRFHPTDEELITHYLCRKVSDIGFTGKAVVDVDLN
pp028835_Pp1s28 MAAPWHQEPQGKDQSQRVESFLPPGFRFHPTDEELVSYYLTKKVLDSRFAVRAIAEVDLN
pp029701_Pp1s22 MADTSVQGPQDTDQSQQGEPFLPPGFRFHPTDEELVSYYLTKKVLDSRFTVHAIAEVDLN
                                  *  **************:::** :** *  *: :*:.:****

AT3G18400.1     KCEPWDLPAKASMGEKEWYFFSQRDRKYPTGLRTNRATEAGYWKTTGKDKEIYRSGV--L
pp028835_Pp1s28 KCEPWDLPEKAKMGEKEWYFFSLRDRKYPTGMRTNRATDAGYWKATGKDRDVLAHGRPRL
pp029701_Pp1s22 KCEPWDLPVKAKMGEKEWYFFSLRDRKYPTGMRTNRATDAGYWKATGKDRDVFAHGRSHL
                ******** **.********** ********:******:*****:****:::   *   *

AT3G18400.1     VGMKKTLVFYKGRAPKGEKSNWVMHEYRLESK--QPFNP-TNKEEWVVCRVFEKSTAAKK
pp028835_Pp1s28 IGMKKTLVFYMGRAPKGEKTNWIMHEYRLENDGGHPLSPRANKDEWVVCRIFEKSSGGKR
pp029701_Pp1s22 VGMKKTLVFYRGRAPKGEKTNWIMHEYRLEGDGGHSLPPRVNKDEWVVCRIFQKSSGAKR
                :********* ********:**:*******..  :.: * .**:******:*:**:..*:

AT3G18400.1     A--------------QEQQPQSSQPSF---GSP------------CDA---NSSMA---N
pp028835_Pp1s28 GFSMSESHMRQGMAYQLEDARSSLPPLMDNESPNPTVIDERTATNCETFVETEQMS-CYN
pp029701_Pp1s22 SFLFSDSRMRQAIVYQLEDVRSSLPPDMDNNSPNPTVTDGGTCTDCETCAGTEQMSACYN
                .              * :: :** *.     **            *::   ...*:   *

AT3G18400.1     EFEDIDELPNLNSNSSTID-----------------YNNHIHQ-YSQRNVYSED--NTTS
pp028835_Pp1s28 RVQDFDHKKEMNCVMSWINVQPAGMDMVPQVGGLSSLDNGLPKPYPGNEIC-EKSMSLSR
pp029701_Pp1s22 CVHDFDHDKDTNGVMSWINTQPAGMDILQQVGGLNNLNNLLSKPYPMYDASYEKGMNLPR
                 ..*:*.  : *   * *:                  :* : : *.  :   *.  . . 

AT3G18400.1     TAGLNMNMNMASTNLQSWTTSLLGPPLSPINSLLLKAFQIRNSYSFPKEMIPSFNH----
pp028835_Pp1s28 QAGFNQQALMQSANMTTTTG--------------FRVTSLR-----PKTEPLSFSEGEDE
pp029701_Pp1s22 QLGFTPQVLMQPANMTTPTG--------------LRVASLR-----PKTEPSSFSEGEDE
                  *:. :  * .:*: : *               ::. .:*     **    **..    

AT3G18400.1     -SSLQQGV-----------SNMIQN----ASSSSQVQPQ---------------------
pp028835_Pp1s28 AQSTQKGCDYVNWPADLAGASLYQNDGTEGDSSSPLQSSTGGTDLSCLTGSLCSGENMSF
pp029701_Pp1s22 AQSIPEGYEYGAWQTEKAEASLYNNDGTGDDSSSPLQSSTGGTELSCLTGSLCSGENGS-
                 .*  :*            :.: :*     .*** :*..                     

AT3G18400.1     -----------PQEEAFNMDSI-W--
pp028835_Pp1s28 DFKYRLQDITAPVDSGHGPEIIGWA-
pp029701_Pp1s22 -YKYRLPDITAPVDAGFGHEILTWAY
                           * : ... : : *
BoxShade v3.31 C (beta, 970507) Output
AT3G18400.1     - - - - - - - - - - - - - - - - - M E E N L P P G F R F H P T D E E L I T H Y L C R K V S D I G F T G K A V V D V D L N
pp028835_Pp1s28    M A A P W H Q E P Q G K D Q S Q R V E S F L P P G F R F H P T D E E L V S Y Y L T K K V L D S R F A V R A I A E V D L N
pp029701_Pp1s22    M A D T S V Q G P Q D T D Q S Q Q G E P F L P P G F R F H P T D E E L V S Y Y L T K K V L D S R F T V H A I A E V D L N
 
AT3G18400.1     K C E P W D L P A K A S M G E K E W Y F F S Q R D R K Y P T G L R T N R A T E A G Y W K T T G K D K E I Y R S G V - - L
pp028835_Pp1s28    K C E P W D L P E K A K M G E K E W Y F F S L R D R K Y P T G M R T N R A T D A G Y W K A T G K D R D V L A H G R P R L
pp029701_Pp1s22    K C E P W D L P V K A K M G E K E W Y F F S L R D R K Y P T G M R T N R A T D A G Y W K A T G K D R D V F A H G R S H L
 
AT3G18400.1     V G M K K T L V F Y K G R A P K G E K S N W V M H E Y R L E S K - - Q P F N P - T N K E E W V V C R V F E K S T A A K K
pp028835_Pp1s28    I G M K K T L V F Y M G R A P K G E K T N W I M H E Y R L E N D G G H P L S P R A N K D E W V V C R I F E K S S G G K R
pp029701_Pp1s22    V G M K K T L V F Y R G R A P K G E K T N W I M H E Y R L E G D G G H S L P P R V N K D E W V V C R I F Q K S S G A K R
 
AT3G18400.1     A - - - - - - - - - - - - - - Q E Q Q P Q S S Q P S F - - - G S P - - - - - - - - - - - - C D A - - - N S S M A - - - N
pp028835_Pp1s28    G F S M S E S H M R Q G M A Y Q L E D A R S S L P P L M D N E S P N P T V I D E R T A T N C E T F V E T E Q M S - C Y N
pp029701_Pp1s22    S F L F S D S R M R Q A I V Y Q L E D V R S S L P P D M D N N S P N P T V T D G G T C T D C E T C A G T E Q M S A C Y N
 
AT3G18400.1     E F E D I D E L P N L N S N S S T I D - - - - - - - - - - - - - - - - - Y N N H I H Q - Y S Q R N V Y S E D - - N T T S
pp028835_Pp1s28    R V Q D F D H K K E M N C V M S W I N V Q P A G M D M V P Q V G G L S S L D N G L P K P Y P G N E I C - E K S M S L S R
pp029701_Pp1s22    C V H D F D H D K D T N G V M S W I N T Q P A G M D I L Q Q V G G L N N L N N L L S K P Y P M Y D A S Y E K G M N L P R
 
AT3G18400.1     T A G L N M N M N M A S T N L Q S W T T S L L G P P L S P I N S L L L K A F Q I R N S Y S F P K E M I P S F N H - - - -
pp028835_Pp1s28    Q A G F N Q Q A L M Q S A N M T T T T G - - - - - - - - - - - - - - F R V T S L R - - - - - P K T E P L S F S E G E D E
pp029701_Pp1s22    Q L G F T P Q V L M Q P A N M T T P T G - - - - - - - - - - - - - - L R V A S L R - - - - - P K T E P S S F S E G E D E
 
AT3G18400.1     - S S L Q Q G V - - - - - - - - - - - S N M I Q N - - - - A S S S S Q V Q P Q - - - - - - - - - - - - - - - - - - - - -
pp028835_Pp1s28    A Q S T Q K G C D Y V N W P A D L A G A S L Y Q N D G T E G D S S S P L Q S S T G G T D L S C L T G S L C S G E N M S F
pp029701_Pp1s22    A Q S I P E G Y E Y G A W Q T E K A E A S L Y N N D G T G D D S S S P L Q S S T G G T E L S C L T G S L C S G E N G S -
 
AT3G18400.1     - - - - - - - - - - - P Q E E A F N M D S I - W - -
pp028835_Pp1s28    D F K Y R L Q D I T A P V D S G H G P E I I G W A -
pp029701_Pp1s22    - Y K Y R L P D I T A P V D A G F G H E I L T W A Y
 
0