fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G18400.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt023978 not found in 321aa AT3G18400.1 not_1st 0.539495798 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G18400.1     MEENLPPGFRFHPTDEELITHYLCRKVSDIGFTGKAVVDVDLNKCEPWDLPAKASMGEKE
pt023978_POPTR_ MEENLPPGFRFHPTDEELITCYLTRKVSDTSFTSKAMVDVDLNKCEPWDLPGKASMGEKE
                ******************** ** ***** .**.**:**************.********

AT3G18400.1     WYFFSQRDRKYPTGLRTNRATEAGYWKTTGKDKEIYRSGVLVGMKKTLVFYKGRAPKGEK
pt023978_POPTR_ WYFFSLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFRAGVLVGMKKTLVFYRGRAPRGEK
                ***** *****************************:*:*************:****:***

AT3G18400.1     SNWVMHEYRLESKQPFNPTNKEEWVVCRVFEKSTAAKKAQEQQPQSSQPSFGSPCDANSS
pt023978_POPTR_ SNWVMHEYRLDDKHPFKST-KEEWVVCRVFQKSTEVKKPQ-QEP-SSQQSLGSPCDTNSI
                **********:.*:**:.* **********:*** .**.* *:* *** *:*****:** 

AT3G18400.1     MANEFEDIDELPNLNSNSSTIDYNNHI-HQYSQRNVYSEDNTTSTAGLNMNMNMA----S
pt023978_POPTR_ VNDKFGDI-------ANSSS-GFNNILAHSY---------NNESNVNVDSHMNWAAAREA
                : ::* **       :***: .:** : *.*         *. *...:: :** *    :

AT3G18400.1     TNLQS--WTTSLLGPPLSPINSLLLKAFQIRNSYSFPKEMIPSFNHSSLQQGVSNMIQNA
pt023978_POPTR_ ATLPSLAWPSGLLSTNLT-MNSLLLKALQLR---SYQQREATTTNYSFLTNGIPHEYGAA
                :.* *  *.:.**.. *: :*******:*:*   *: :.  .: *:* * :*:.:    *

AT3G18400.1     ------SSSSQV---QPQPQEEA-FNMDSIW--------------
pt023978_POPTR_ LGSNFQASSSKVLDSAPQPQQEQPFSLDSINCTGKVSKRSSVKLV
                      :***:*    ****:*  *.:***
BoxShade v3.31 C (beta, 970507) Output
AT3G18400.1     M E E N L P P G F R F H P T D E E L I T H Y L C R K V S D I G F T G K A V V D V D L N K C E P W D L P A K A S M G E K E
pt023978_POPTR_    M E E N L P P G F R F H P T D E E L I T C Y L T R K V S D T S F T S K A M V D V D L N K C E P W D L P G K A S M G E K E
 
AT3G18400.1     W Y F F S Q R D R K Y P T G L R T N R A T E A G Y W K T T G K D K E I Y R S G V L V G M K K T L V F Y K G R A P K G E K
pt023978_POPTR_    W Y F F S L R D R K Y P T G L R T N R A T E A G Y W K T T G K D K E I F R A G V L V G M K K T L V F Y R G R A P R G E K
 
AT3G18400.1     S N W V M H E Y R L E S K Q P F N P T N K E E W V V C R V F E K S T A A K K A Q E Q Q P Q S S Q P S F G S P C D A N S S
pt023978_POPTR_    S N W V M H E Y R L D D K H P F K S T - K E E W V V C R V F Q K S T E V K K P Q - Q E P - S S Q Q S L G S P C D T N S I
 
AT3G18400.1     M A N E F E D I D E L P N L N S N S S T I D Y N N H I - H Q Y S Q R N V Y S E D N T T S T A G L N M N M N M A - - - - S
pt023978_POPTR_    V N D K F G D I - - - - - - - A N S S S - G F N N I L A H S Y - - - - - - - - - N N E S N V N V D S H M N W A A A R E A
 
AT3G18400.1     T N L Q S - - W T T S L L G P P L S P I N S L L L K A F Q I R N S Y S F P K E M I P S F N H S S L Q Q G V S N M I Q N A
pt023978_POPTR_    A T L P S L A W P S G L L S T N L T - M N S L L L K A L Q L R - - - S Y Q Q R E A T T T N Y S F L T N G I P H E Y G A A
 
AT3G18400.1     - - - - - - S S S S Q V - - - Q P Q P Q E E A - F N M D S I W - - - - - - - - - - - - - -
pt023978_POPTR_    L G S N F Q A S S S K V L D S A P Q P Q Q E Q P F S L D S I N C T G K V S K R S S V K L V
 
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