fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G18400.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb006176 TLSGSGLNLNLGASPA in 280/376 AT2G24430.2 not_not 0.430252100 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G18400.1     ----------------MEENLPPGFRFHPTDEELITHYLCRKVSDIGFTGKAVVDVDLNK
Sb006176_Sorbi1 MEAGGGGGGGGGESKKKEESLPPGFRFHPTDEELITYYLRQKIADGSFTARAIAEVDLNK
                                 **.****************:** :*::* .**.:*:.:*****

AT3G18400.1     CEPWDLPAKASMGEKEWYFFSQRDRKYPTGLRTNRATEAGYWKTTGKDKEIYRSGV----
Sb006176_Sorbi1 CEPWDLPEKAKLGEKEWYFFSLRDRKYPTGVRTNRATNAGYWKTTGKDKEIYTGQLPATP
                ******* **.:********* ********:******:************** . :    

AT3G18400.1     -LVGMKKTLVFYKGRAPKGEKSNWVMHEYRLESKQPFNPTNKEEWVVCRVFEKSTAAKKA
Sb006176_Sorbi1 ELVGMKKTLVFYKGRAPRGEKTNWVMHEYRLHSKS-VPKSNKDEWVVCRVFAKSAGAKKY
                 ****************:***:*********.**. .  :**:******** **:.*** 

AT3G18400.1     QEQQPQSSQPSFGSP--CDANSSMANEFEDIDELPNLNSNSSTIDYNNHIHQYS------
Sb006176_Sorbi1 PSNNAHSRSSHHHHPYALDMVPPL---------LPTLLQHDPFARHHGHHHHHPYMTPAD
                 .::.:* .. .  *   *  ..:         **.* .:..   ::.* *::.      

AT3G18400.1     --------------QRNVYSEDNTTSTAGLNMNMNMASTNLQSWTTS-------LLGPPL
Sb006176_Sorbi1 LAELARFARGTPGLHPHIQPHPGTSAAAAAYMNPAVAAAAPPSFTLSGSGLNLNLGASPA
                              : :: .. .*:::*.  **  :*::   *:* *       * ..* 

AT3G18400.1     SPINSLLLKAF------QIRNSYSFPKEMIPSFNHSSLQQGVSNMIQNASSSSQVQPQPQ
Sb006176_Sorbi1 MPSPPQALHAMSMAMGGQTGNHHQV---MAGEHQHQHHQQ---QMATAAGLGGCVIVPGA
                 *  .  *:*:      *  * :..   *  ..:*.  **   :*   *. .. *     

AT3G18400.1     EEAFNMDSI----------------W------
Sb006176_Sorbi1 DGGFGADAAGGRYQSLDVEQLVERYWPAGYQV
                : .*. *:                 *
BoxShade v3.31 C (beta, 970507) Output
AT3G18400.1     - - - - - - - - - - - - - - - - M E E N L P P G F R F H P T D E E L I T H Y L C R K V S D I G F T G K A V V D V D L N K
Sb006176_Sorbi1    M E A G G G G G G G G G E S K K K E E S L P P G F R F H P T D E E L I T Y Y L R Q K I A D G S F T A R A I A E V D L N K
 
AT3G18400.1     C E P W D L P A K A S M G E K E W Y F F S Q R D R K Y P T G L R T N R A T E A G Y W K T T G K D K E I Y R S G V - - - -
Sb006176_Sorbi1    C E P W D L P E K A K L G E K E W Y F F S L R D R K Y P T G V R T N R A T N A G Y W K T T G K D K E I Y T G Q L P A T P
 
AT3G18400.1     - L V G M K K T L V F Y K G R A P K G E K S N W V M H E Y R L E S K Q P F N P T N K E E W V V C R V F E K S T A A K K A
Sb006176_Sorbi1    E L V G M K K T L V F Y K G R A P R G E K T N W V M H E Y R L H S K S - V P K S N K D E W V V C R V F A K S A G A K K Y
 
AT3G18400.1     Q E Q Q P Q S S Q P S F G S P - - C D A N S S M A N E F E D I D E L P N L N S N S S T I D Y N N H I H Q Y S - - - - - -
Sb006176_Sorbi1    P S N N A H S R S S H H H H P Y A L D M V P P L - - - - - - - - - L P T L L Q H D P F A R H H G H H H H H P Y M T P A D
 
AT3G18400.1     - - - - - - - - - - - - - - Q R N V Y S E D N T T S T A G L N M N M N M A S T N L Q S W T T S - - - - - - - L L G P P L
Sb006176_Sorbi1    L A E L A R F A R G T P G L H P H I Q P H P G T S A A A A A Y M N P A V A A A A P P S F T L S G S G L N L N L G A S P A
 
AT3G18400.1     S P I N S L L L K A F - - - - - - Q I R N S Y S F P K E M I P S F N H S S L Q Q G V S N M I Q N A S S S S Q V Q P Q P Q
Sb006176_Sorbi1    M P S P P Q A L H A M S M A M G G Q T G N H H Q V - - - M A G E H Q H Q H H Q Q - - - Q M A T A A G L G G C V I V P G A
 
AT3G18400.1     E E A F N M D S I - - - - - - - - - - - - - - - - W - - - - - -
Sb006176_Sorbi1    D G G F G A D A A G G R Y Q S L D V E Q L V E R Y W P A G Y Q V
 
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