fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G18400.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb000733 not found in 341aa AT3G18400.1 1st_1st 0.458823529 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G18400.1     MEENLPPGFRFHPTDEELITHYLCRKVSDIGFTGKAVVDVDLNKCEPWDLPAKASMGEKE
Sb000733_Sorbi1 MEEGLPPGFRFHPTDEELVTYYLTRKVSDFAFATRAIADVDLNKCEPWDLPSKASMGEKE
                ***.**************:*:** *****:.*: :*:.*************:********

AT3G18400.1     WYFFSQRDRKYPTGLRTNRATEAGYWKTTGKDKEIYRSGVLVGMKKTLVFYKGRAPKGEK
Sb000733_Sorbi1 WYFFSMRDRKYPTGIRTNRATDSGYWKTTGKDKEIFHCGMLVGMKKTLVFYRGRAPKGQK
                ***** ********:******::************::.*:***********:******:*

AT3G18400.1     SNWVMHEYRLESKQPFNPTNKEEWVVCRVFEKSTAAKKAQEQQPQSSQPSFGSPC-DANS
Sb000733_Sorbi1 TSWVMHEYRLQNKFPYKP-NKEEWVVCRVFKKCQVIK----MRPPQDSPTMGSPCHDAGN
                :.********:.* *::* ***********:*. . *     :* ...*::**** **..

AT3G18400.1     SMANEFEDID------ELPNLNSNSSTIDYNNHIHQYSQRNVYSEDNTTSTAGLNMNMN-
Sb000733_Sorbi1 ASLGELGELDVSSILGGLAAAAAHTSSGSPPGVLHH--QGSAAAAESFVGAHNRPVDMSA
                :  .*: ::*       *.   :::*: .  . :*:  * .. : :. ..: .  ::*. 

AT3G18400.1     ----MASTN--------LQSWTTS----LLGPPLSPINSLLLKAFQIRNSYSFPKEMIPS
Sb000733_Sorbi1 YMSWMAAANQGAAAAAAMLPWATTTPPGLFGNVFAPNNHQLL------------QKPLPF
                    **::*        : .*:*:    *:*  ::* *  **            :: :* 

AT3G18400.1     FNHSSLQ-QGVSNMIQN------------ASSSSQV-----QPQPQEEAFNMD-SIW---
Sb000733_Sorbi1 AGGCSGQPRGLGGVVANNVVVGSGEHAMFGSSVVKVGMECDQQQQPEQQLGMDESTWRTF
                 . .* * :*:..:: *            .**  :*     * *  *: :.** * *
BoxShade v3.31 C (beta, 970507) Output
AT3G18400.1     M E E N L P P G F R F H P T D E E L I T H Y L C R K V S D I G F T G K A V V D V D L N K C E P W D L P A K A S M G E K E
Sb000733_Sorbi1    M E E G L P P G F R F H P T D E E L V T Y Y L T R K V S D F A F A T R A I A D V D L N K C E P W D L P S K A S M G E K E
 
AT3G18400.1     W Y F F S Q R D R K Y P T G L R T N R A T E A G Y W K T T G K D K E I Y R S G V L V G M K K T L V F Y K G R A P K G E K
Sb000733_Sorbi1    W Y F F S M R D R K Y P T G I R T N R A T D S G Y W K T T G K D K E I F H C G M L V G M K K T L V F Y R G R A P K G Q K
 
AT3G18400.1     S N W V M H E Y R L E S K Q P F N P T N K E E W V V C R V F E K S T A A K K A Q E Q Q P Q S S Q P S F G S P C - D A N S
Sb000733_Sorbi1    T S W V M H E Y R L Q N K F P Y K P - N K E E W V V C R V F K K C Q V I K - - - - M R P P Q D S P T M G S P C H D A G N
 
AT3G18400.1     S M A N E F E D I D - - - - - - E L P N L N S N S S T I D Y N N H I H Q Y S Q R N V Y S E D N T T S T A G L N M N M N -
Sb000733_Sorbi1    A S L G E L G E L D V S S I L G G L A A A A A H T S S G S P P G V L H H - - Q G S A A A A E S F V G A H N R P V D M S A
 
AT3G18400.1     - - - - M A S T N - - - - - - - - L Q S W T T S - - - - L L G P P L S P I N S L L L K A F Q I R N S Y S F P K E M I P S
Sb000733_Sorbi1    Y M S W M A A A N Q G A A A A A A M L P W A T T T P P G L F G N V F A P N N H Q L L - - - - - - - - - - - - Q K P L P F
 
AT3G18400.1     F N H S S L Q - Q G V S N M I Q N - - - - - - - - - - - - A S S S S Q V - - - - - Q P Q P Q E E A F N M D - S I W - - -
Sb000733_Sorbi1    A G G C S G Q P R G L G G V V A N N V V V G S G E H A M F G S S V V K V G M E C D Q Q Q Q P E Q Q L G M D E S T W R T F
 
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