fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G18400.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb000733 not found in 341aa AT3G18400.1 1st_1st 0.458823529 Ia
Sb006176 TLSGSGLNLNLGASPA in 280/376 AT2G24430.2 not_not 0.430252100 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G18400.1     ----------------MEENLPPGFRFHPTDEELITHYLCRKVSDIGFTGKAVVDVDLNK
Sb006176_Sorbi1 MEAGGGGGGGGGESKKKEESLPPGFRFHPTDEELITYYLRQKIADGSFTARAIAEVDLNK
Sb000733_Sorbi1 ----------------MEEGLPPGFRFHPTDEELVTYYLTRKVSDFAFATRAIADVDLNK
                                 **.**************:*:** :*::* .*: :*:.:*****

AT3G18400.1     CEPWDLPAKASMGEKEWYFFSQRDRKYPTGLRTNRATEAGYWKTTGKDKEIYRSGV----
Sb006176_Sorbi1 CEPWDLPEKAKLGEKEWYFFSLRDRKYPTGVRTNRATNAGYWKTTGKDKEIYTGQLPATP
Sb000733_Sorbi1 CEPWDLPSKASMGEKEWYFFSMRDRKYPTGIRTNRATDSGYWKTTGKDKEIFHCGM----
                ******* **.:********* ********:******::************:   :    

AT3G18400.1     -LVGMKKTLVFYKGRAPKGEKSNWVMHEYRLESKQPFNPTNKEEWVVCRVFEKSTAAKKA
Sb006176_Sorbi1 ELVGMKKTLVFYKGRAPRGEKTNWVMHEYRLHSKSVPKS-NKDEWVVCRVFAKSAGAKKY
Sb000733_Sorbi1 -LVGMKKTLVFYRGRAPKGQKTSWVMHEYRLQNKFPYKP-NKEEWVVCRVFKKCQVIK--
                 ***********:****:*:*:.********..*   :. **:******** *.   *  

AT3G18400.1     QEQQPQSSQPSFGSPC-DANSSMANEFEDID------ELPNLNSNSSTIDYNNHIHQY--
Sb006176_Sorbi1 --------------PSNNAHSRSSHHHHPYALDMVPPLLPTLLQHDPFARHHGHHHHHPY
Sb000733_Sorbi1 --MRPPQDSPTMGSPCHDAGNASLGELGELDVSSILGGLAAAAAHTSSGSPPGVLHH---
                              *. :* .    .            *.    : .     .  *:   

AT3G18400.1     -SQRNVYSEDNTT-STAGLNMNMN-------MASTN--------LQSWTTS--------L
Sb006176_Sorbi1 MTPADLAELARFARGTPGLHPHIQPHPGTSAAAAAYMNPAVAAAAPPSFTLSGSGLNLNL
Sb000733_Sorbi1 --QGSAAAAESFV-GAHNRPVDMSAY--MSWMAAANQGAAAAAAMLPWATTTPPG----L
                    .       . .: .   .:.        *::           .  *         *

AT3G18400.1     LGPPLSPINSLLLKAFQIRNSYSFPKEMIPSFNHSSLQ-QGVSNMIQN------------
Sb006176_Sorbi1 GASPAMPSPPQALHAMS----------------------MAMGGQTGNHHQVMAGEH---
Sb000733_Sorbi1 FGNVFAPNNHQLL------------QKPLPFAGGCSGQPRGLGGVVANNVVVGSGEHAMF
                 .    *     *                           .:..   *            

AT3G18400.1     ASSSSQV-----QPQPQEEA-------------------FNMD----------------S
Sb006176_Sorbi1 ------------QHQHHQQQMATAAGLGGCVIVPGADGGFGADAAGGRYQSLDVEQLVER
Sb000733_Sorbi1 GSSVVKVGMECDQQQQPEQQ-------------------LGMD---------------ES
                            * *  ::                    :. *                 

AT3G18400.1     IW------
Sb006176_Sorbi1 YWPAGYQV
Sb000733_Sorbi1 TWRTF---
                 *
BoxShade v3.31 C (beta, 970507) Output
AT3G18400.1     - - - - - - - - - - - - - - - - M E E N L P P G F R F H P T D E E L I T H Y L C R K V S D I G F T G K A V V D V D L N K
Sb006176_Sorbi1    M E A G G G G G G G G G E S K K K E E S L P P G F R F H P T D E E L I T Y Y L R Q K I A D G S F T A R A I A E V D L N K
Sb000733_Sorbi1    - - - - - - - - - - - - - - - - M E E G L P P G F R F H P T D E E L V T Y Y L T R K V S D F A F A T R A I A D V D L N K
 
AT3G18400.1     C E P W D L P A K A S M G E K E W Y F F S Q R D R K Y P T G L R T N R A T E A G Y W K T T G K D K E I Y R S G V - - - -
Sb006176_Sorbi1    C E P W D L P E K A K L G E K E W Y F F S L R D R K Y P T G V R T N R A T N A G Y W K T T G K D K E I Y T G Q L P A T P
Sb000733_Sorbi1    C E P W D L P S K A S M G E K E W Y F F S M R D R K Y P T G I R T N R A T D S G Y W K T T G K D K E I F H C G M - - - -
 
AT3G18400.1     - L V G M K K T L V F Y K G R A P K G E K S N W V M H E Y R L E S K Q P F N P T N K E E W V V C R V F E K S T A A K K A
Sb006176_Sorbi1    E L V G M K K T L V F Y K G R A P R G E K T N W V M H E Y R L H S K S V P K S - N K D E W V V C R V F A K S A G A K K Y
Sb000733_Sorbi1    - L V G M K K T L V F Y R G R A P K G Q K T S W V M H E Y R L Q N K F P Y K P - N K E E W V V C R V F K K C Q V I K - -
 
AT3G18400.1     Q E Q Q P Q S S Q P S F G S P C - D A N S S M A N E F E D I D - - - - - - E L P N L N S N S S T I D Y N N H I H Q Y - -
Sb006176_Sorbi1    - - - - - - - - - - - - - - P S N N A H S R S S H H H H P Y A L D M V P P L L P T L L Q H D P F A R H H G H H H H H P Y
Sb000733_Sorbi1    - - M R P P Q D S P T M G S P C H D A G N A S L G E L G E L D V S S I L G G L A A A A A H T S S G S P P G V L H H - - -
 
AT3G18400.1     - S Q R N V Y S E D N T T - S T A G L N M N M N - - - - - - - M A S T N - - - - - - - - L Q S W T T S - - - - - - - - L
Sb006176_Sorbi1    M T P A D L A E L A R F A R G T P G L H P H I Q P H P G T S A A A A A Y M N P A V A A A A P P S F T L S G S G L N L N L
Sb000733_Sorbi1    - - Q G S A A A A E S F V - G A H N R P V D M S A Y - - M S W M A A A N Q G A A A A A A M L P W A T T T P P G - - - - L
 
AT3G18400.1     L G P P L S P I N S L L L K A F Q I R N S Y S F P K E M I P S F N H S S L Q - Q G V S N M I Q N - - - - - - - - - - - -
Sb006176_Sorbi1    G A S P A M P S P P Q A L H A M S - - - - - - - - - - - - - - - - - - - - - - M A M G G Q T G N H H Q V M A G E H - - -
Sb000733_Sorbi1    F G N V F A P N N H Q L L - - - - - - - - - - - - Q K P L P F A G G C S G Q P R G L G G V V A N N V V V G S G E H A M F
 
AT3G18400.1     A S S S S Q V - - - - - Q P Q P Q E E A - - - - - - - - - - - - - - - - - - - F N M D - - - - - - - - - - - - - - - - S
Sb006176_Sorbi1    - - - - - - - - - - - - Q H Q H H Q Q Q M A T A A G L G G C V I V P G A D G G F G A D A A G G R Y Q S L D V E Q L V E R
Sb000733_Sorbi1    G S S V V K V G M E C D Q Q Q Q P E Q Q - - - - - - - - - - - - - - - - - - - L G M D - - - - - - - - - - - - - - - E S
 
AT3G18400.1     I W - - - - - -
Sb006176_Sorbi1    Y W P A G Y Q V
Sb000733_Sorbi1    T W R T F - - -
 
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