fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G18400.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm020177 not found in 301aa AT3G18400.1 not_1st 0.551260504 II
Gm017941 not found in 324aa AT3G18400.1 not_1st 0.546218487 II
Gm025258 not found in 331aa AT3G18400.1 not_1st 0.539495798 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G18400.1     MEENLPPGFRFHPTDEELITHYLCRKVSDIGFTGKAVVDVDLNKCEPWDLPAKASMGEKE
gm017941_Glyma0 MEENLPPGFRFHPTDEELITCYLTRKVSDSSFTSKAIAVVDLNKCEPWDLPGKASMGKKE
gm020177_Glyma0 MEEKLPPGFKFHPTDEELITYYLLRKVSDVGFTSKAVAVVDLNKSEPWDLPGKASMGEKE
gm025258_Glyma0 MEENLPPGFRFHPTDEELITCYLTRKVSDSSFTSKAIAVVDLKKSEPWDLPGKASMGKKE
                ***:*****:********** ** ***** .**.**:. ***:*.******.*****:**

AT3G18400.1     WYFFSQRDRKYPTGLRTNRATEAGYWKTTGKDKEIYRSGVLVGMKKTLVFYKGRAPKGEK
gm017941_Glyma0 WYFFSLRDRKYPTGLRTNRATESGYWKTTGKDKEIFRAGVLVGMKKTLVFYRGRAPRGEK
gm020177_Glyma0 WYFFSLKDRKYPTGLRTNRATESGYWKTTGKDKEIFGGGVLIGMKKTLVFYMGRAPRGEK
gm025258_Glyma0 WYFFSLRDRKYPTGLRTNRATESGYWKTTGKDKEIFRAGVLVGMKKTLVFYRGRAPRGEK
                ***** :***************:************: .***:********* ****:***

AT3G18400.1     SNWVMHEYRLESKQPFNPTNKEEWVVCRVFEKSTAAKKAQEQQPQSSQPSFGSPCDANSS
gm017941_Glyma0 SNWVMHEYRLENKHHFGPS-KDEWVVCRVFQKSLQVKRP--QQTPSSQP--ESPCD-TAS
gm020177_Glyma0 SNWVMHEYRLANKQPYRSS-KEERVICRVFQKSSAPKKP--QQTSSSQPSQESP----TS
gm025258_Glyma0 SNWVMHEYRLENKNHFRPS-KDEWVVCRVFQKSLQMKRP--QQTPPSQP--ESPCD-TAS
                ********** .*: : .: *:* *:****:**   *:.  **. .***   **    :*

AT3G18400.1     MANEFEDIDELPNL-NS--NSSTIDYNNHIHQYSQRNVYSED--NTTSTAGLNMNMN--M
gm017941_Glyma0 MVNEFGDVE-LPNLINNIANSSG-GLTNNI---SGQTCFNADLINSVNT-NMNLAMNWPV
gm020177_Glyma0 MVNEFGDVD-LPNL-NSIANSSS-SFTNNI---AYN--INGDPSNAVNT-NMNLTMN---
gm025258_Glyma0 MVNEFGDVE-LPNLINNIANSSSDGITNNI---SGQTFFNADLINSVNT-NMNLTMNWPV
                *.*** *:: **** *.  ***  . .*:*   : .   . *  *:..* .:*: **   

AT3G18400.1     ASTNLQS-------WTTSLLGPPLSPINSLLLKAFQIRNSYSFPKEMIPSFNHSSLQ---
gm017941_Glyma0 ASEVIQVPTLPSLPWPSGLLNPSIS-VNSLLLKALQLR-SYQ-QRE----AATDHLIASY
gm020177_Glyma0 --------------WPSGFLNPNLS-VNSLLLKASQLRNTYQ-QREAATRFSHNNTI---
gm025258_Glyma0 ASEVIQVPTLPSLPWPSGLLNPSIS-VNSLLLKALQLR-SYQ-QIEAAAAAATDHLIASY
                              *.:.:*.* :* :******* *:* :*.   *       .      

AT3G18400.1     --QGVS----------NMIQNASSSSQVQ----PQPQ--EEAFNMDSIW
gm017941_Glyma0 VPQGVS-HVGTDL-SSNLTA--SSSKVLE--CMPQQQQLEQPFNLDSIW
gm020177_Glyma0 ---GTEHH----LMTPNLSATSSSSKALEYSCVPQQ---EQPFNMDSIW
gm025258_Glyma0 MPQGVSQHVGTNLISSSLTA-SSSSKVLE--CVPQQQQ-EQPFNLDSIW
                   *..          .:    ***. ::    **    *:.**:****
BoxShade v3.31 C (beta, 970507) Output
AT3G18400.1     M E E N L P P G F R F H P T D E E L I T H Y L C R K V S D I G F T G K A V V D V D L N K C E P W D L P A K A S M G E K E
gm017941_Glyma0    M E E N L P P G F R F H P T D E E L I T C Y L T R K V S D S S F T S K A I A V V D L N K C E P W D L P G K A S M G K K E
gm020177_Glyma0    M E E K L P P G F K F H P T D E E L I T Y Y L L R K V S D V G F T S K A V A V V D L N K S E P W D L P G K A S M G E K E
gm025258_Glyma0    M E E N L P P G F R F H P T D E E L I T C Y L T R K V S D S S F T S K A I A V V D L K K S E P W D L P G K A S M G K K E
 
AT3G18400.1     W Y F F S Q R D R K Y P T G L R T N R A T E A G Y W K T T G K D K E I Y R S G V L V G M K K T L V F Y K G R A P K G E K
gm017941_Glyma0    W Y F F S L R D R K Y P T G L R T N R A T E S G Y W K T T G K D K E I F R A G V L V G M K K T L V F Y R G R A P R G E K
gm020177_Glyma0    W Y F F S L K D R K Y P T G L R T N R A T E S G Y W K T T G K D K E I F G G G V L I G M K K T L V F Y M G R A P R G E K
gm025258_Glyma0    W Y F F S L R D R K Y P T G L R T N R A T E S G Y W K T T G K D K E I F R A G V L V G M K K T L V F Y R G R A P R G E K
 
AT3G18400.1     S N W V M H E Y R L E S K Q P F N P T N K E E W V V C R V F E K S T A A K K A Q E Q Q P Q S S Q P S F G S P C D A N S S
gm017941_Glyma0    S N W V M H E Y R L E N K H H F G P S - K D E W V V C R V F Q K S L Q V K R P - - Q Q T P S S Q P - - E S P C D - T A S
gm020177_Glyma0    S N W V M H E Y R L A N K Q P Y R S S - K E E R V I C R V F Q K S S A P K K P - - Q Q T S S S Q P S Q E S P - - - - T S
gm025258_Glyma0    S N W V M H E Y R L E N K N H F R P S - K D E W V V C R V F Q K S L Q M K R P - - Q Q T P P S Q P - - E S P C D - T A S
 
AT3G18400.1     M A N E F E D I D E L P N L - N S - - N S S T I D Y N N H I H Q Y S Q R N V Y S E D - - N T T S T A G L N M N M N - - M
gm017941_Glyma0    M V N E F G D V E - L P N L I N N I A N S S G - G L T N N I - - - S G Q T C F N A D L I N S V N T - N M N L A M N W P V
gm020177_Glyma0    M V N E F G D V D - L P N L - N S I A N S S S - S F T N N I - - - A Y N - - I N G D P S N A V N T - N M N L T M N - - -
gm025258_Glyma0    M V N E F G D V E - L P N L I N N I A N S S S D G I T N N I - - - S G Q T F F N A D L I N S V N T - N M N L T M N W P V
 
AT3G18400.1     A S T N L Q S - - - - - - - W T T S L L G P P L S P I N S L L L K A F Q I R N S Y S F P K E M I P S F N H S S L Q - - -
gm017941_Glyma0    A S E V I Q V P T L P S L P W P S G L L N P S I S - V N S L L L K A L Q L R - S Y Q - Q R E - - - - A A T D H L I A S Y
gm020177_Glyma0    - - - - - - - - - - - - - - W P S G F L N P N L S - V N S L L L K A S Q L R N T Y Q - Q R E A A T R F S H N N T I - - -
gm025258_Glyma0    A S E V I Q V P T L P S L P W P S G L L N P S I S - V N S L L L K A L Q L R - S Y Q - Q I E A A A A A A T D H L I A S Y
 
AT3G18400.1     - - Q G V S - - - - - - - - - - N M I Q N A S S S S Q V Q - - - - P Q P Q - - E E A F N M D S I W
gm017941_Glyma0    V P Q G V S - H V G T D L - S S N L T A - - S S S K V L E - - C M P Q Q Q Q L E Q P F N L D S I W
gm020177_Glyma0    - - - G T E H H - - - - L M T P N L S A T S S S S K A L E Y S C V P Q Q - - - E Q P F N M D S I W
gm025258_Glyma0    M P Q G V S Q H V G T N L I S S S L T A - S S S S K V L E - - C V P Q Q Q Q - E Q P F N L D S I W
 
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